Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01322 ATGGCTACGACTTTGGTGAGTTCCGCAGGTGGGATGCTGGCGATGCTCAACGAGTCCCATCTCTTGCTCAAGCTTCACGCGCTCTCCAACCTCAACAAATTGCTAGCACAGTTTACAGAGAGCAGCAGCAACAAACAAAGCAACCACAAAATTTACGCAGCGTTAGATCAATCTTCTCTCTCTGTCCTTTCCATGGTTCCACATTGGTCAGGTCCCCGTGTCACAATGGGTAAGTCACCAGGAAAATGGATCAAAACCGTACTGTTTGGGAAAAAGTCATCCAAATCAAATATTTCAAAAGGGAGAGAGAAGCTTGTTAATAAAAAAGGAGTAATAGTTACCTCCAAAGTGCCAGAAACGGGTTTGACCTTAGAACCAACCTCCAATACTATTCCCAATCATGATGAAGTCCAGGAGCTGGAAAACAAAGAAGCAGAAAATGTTTTACCTGGCAATCAAGAAATAGACTTAGTAGGATCTATTAATGAAGAGGATGCGCTAGATCCAGAGAAAATGAGGCTGGAGGAAGCAGCAACAAAGGCACAAGCTGCTTTCAGGGGTTATTTGGCTCGGAGAGCATTTAGGGCCCTGAAAGGCATAATAAGGTTGCAAGCACTCATTCGCGGGCACCTGGTTAGGAGGCAAGCTGTTGTTACATTATGCTCTATGTATGGTATTGTCAAGTTTCAAGCACTTGTTCGTGGAGGAAGAGTTAGGCAGTCTAATGTTGGATCTGAAATCCATGAGAAGTGCAATATGTTGAACCCTCTGGATGGAAAGTTTGTCAAGCCAATTGCTATATCCACGAAAATTACAAAGCTGTCAGCAAATGCGTTCATTCTTAAGCTTTTTACTTCGTCAACTACAATAATGGCACTGCGTTTGCAATATGTTCCTGGTGATCCAAATTCAGTCCTAAGTTGGTTGGAGCGCTGGTCATCATCTCTATTTTGGAAACCAGTTCCCCAACCCAAGAAAATTCAGGATATTAAGGCTCAAAGAAAGCATGGCAGTACTTCAGTTGGGGATACTCAAACGAGTAAGTCAAAACGTACTAACAGGAAGCTTCCTACCCCGAATTTTGACTCAGTCCCGGTGCAAGCAAGTCATGAATTTGAAAAACCTAAACGAAACACAAGGAAAATTCCAAGTCAACCCTCAGATCCCGTGCAGGAAAACACACAAAATGAATTTGAAAAGGTTAAACGTAACTTGAGAAAGGTTCATAATCCTGTTGTTGAGAATGCTGTTCCTTCAGAAGTTGAAACAGAGCTGCCAAAGGAACATTTGGAAAAGGCCACAGTTACCTCATCCCTTACTGTTTCGGAACAAGAGGTTGTTAGTTTTAATGAGAAGATCAAGAAGGAAGCACCATTAACTGCTTCCAGTGTGCTGGATATAGAAACTACTCCTAGACTTTCAGCTAGTAACGAAATCCTTGACACACCAAGCAGTATTCAAGTGGCTGTGGAATCAAAGCCCTTGACTGAAATTACAACCAAAGATAAAAATATTTCTGATGAAGTAAAATATGAGCCCATAGATTTGCCAGAGTCTAATTTTAAAGATGAAAATTCTCACTTCACAAATGGAGATTTGAGTCACAAGGAAGATCCAATAGGCAGTGAAAACCAGAAACCGAACCGAAAAGCCTCTATTGTAGCAAAACAGGAACGTGCAGAGAATGGTATACAGAATAGTCCAACATTGCCAAGTTACATGGCAGCAACTGAATCTGCGAAGGCAAAGTTGAGGGCACAAGGATCCCCAAGATTTGGACAAGATGGAAGTGAAAGAAACCAGACCCGGCGACATTCTTTGCCATCCTCAACTAACAGCAAAATTAGTTCGCATTCACCTAGGACACACAGACCAGTTCAATCAGGTGGCAAAGGGGGCAACAGAAGTGACAGAACTGTATCAACATCTTCTAGAGATGGGAATGGAAAGGTAATTCAAGCAGAGTGGAGGAGGTAA 1977 0.4244 MATTLVSSAGGMLAMLNESHLLLKLHALSNLNKLLAQFTESSSNKQSNHKIYAALDQSSLSVLSMVPHWSGPRVTMGKSPGKWIKTVLFGKKSSKSNISKGREKLVNKKGVIVTSKVPETGLTLEPTSNTIPNHDEVQELENKEAENVLPGNQEIDLVGSINEEDALDPEKMRLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCSMYGIVKFQALVRGGRVRQSNVGSEIHEKCNMLNPLDGKFVKPIAISTKITKLSANAFILKLFTSSTTIMALRLQYVPGDPNSVLSWLERWSSSLFWKPVPQPKKIQDIKAQRKHGSTSVGDTQTSKSKRTNRKLPTPNFDSVPVQASHEFEKPKRNTRKIPSQPSDPVQENTQNEFEKVKRNLRKVHNPVVENAVPSEVETELPKEHLEKATVTSSLTVSEQEVVSFNEKIKKEAPLTASSVLDIETTPRLSASNEILDTPSSIQVAVESKPLTEITTKDKNISDEVKYEPIDLPESNFKDENSHFTNGDLSHKEDPIGSENQKPNRKASIVAKQERAENGIQNSPTLPSYMAATESAKAKLRAQGSPRFGQDGSERNQTRRHSLPSSTNSKISSHSPRTHRPVQSGGKGGNRSDRTVSTSSRDGNGKVIQAEWRR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01322 658 ProSiteProfiles IQ motif profile. 174 202 IPR000048 GO:0005515
Phco8g01322 658 SMART iq_5 173 195 IPR000048 GO:0005515
Phco8g01322 658 SMART iq_5 196 217 IPR000048 GO:0005515
Phco8g01322 658 ProSiteProfiles IQ motif profile. 198 225 IPR000048 GO:0005515
Phco8g01322 658 MobiDBLite consensus disorder prediction 528 544 - -
Phco8g01322 658 MobiDBLite consensus disorder prediction 603 624 - -
Phco8g01322 658 MobiDBLite consensus disorder prediction 632 649 - -
Phco8g01322 658 Pfam IQ calmodulin-binding motif 198 215 IPR000048 GO:0005515
Phco8g01322 658 Pfam IQ calmodulin-binding motif 176 195 IPR000048 GO:0005515
Phco8g01322 658 PANTHER IQ-DOMAIN 5-RELATED 76 615 - -
Phco8g01322 658 MobiDBLite consensus disorder prediction 327 394 - -
Phco8g01322 658 Gene3D - 171 222 - -
Phco8g01322 658 Pfam Protein of unknown function (DUF4005) 557 636 IPR025064 -
Phco8g01322 658 MobiDBLite consensus disorder prediction 334 365 - -
Phco8g01322 658 MobiDBLite consensus disorder prediction 559 574 - -
Phco8g01322 658 MobiDBLite consensus disorder prediction 509 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01322 Phco-Chr8 13770004 13781894 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01322 8 13770004 13781894 Phco7g02277 7 40107027 40114358 ECH
Phco8g01322 8 13770004 13781894 Phco8g01322 8 13770004 13781894 ECH