Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02277 ATGCCTCACATTCCCCAAACACGCCACTCCGCGCGTGAGATTCGCATTTCCACTCAAGGGCACCAAAGTCATTTCGCAATAAAGGAGCTGGCACACTTGGTTCCGAATTCTCATTTTCAGTTTCACCTCTTCCATGGAATTGTAAGATTTGAGACCAGGAGATTTCACGTTTCTCAGATTTGCTGGGTGTTTGTGTCTTGTTTACTATTAGTAACTGTAATTGTTGAGGTTTTCGTGAAAATTCCAGTTGGTTGTAATCTCAGAATGGGGAAATCACCAGGAAAATGGATCAAAACTGTACTATTTGGGAAAAAGTCATCCAGATCAAATATGTCAAAGGGAAGAGAGATTGTTAATAAAAGAGAGGCAGTGGTTGCTTCCAACGTGTTGGAAAATGGTTTGGCCTTAGATCCAAACCACAATGAGATTGCTACAAATGAGGAGGACCTTGAACTGGAGAATGAAGAATCAGAAGTTATTTTACCTGAGAATCAAGAAAGAGAAAGTATAGGACCTGTTGATCCATATGCACCACCTGATCCAGAGAAAATCAGGCAGGAGGTAGCAGCAATAAAGGCACAAGCTGCTTTCAGGGGTTACTTGGCTCGCAGGGCATTTAGGGCTCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGACACCTAGTTAGGAGACAAGCTGTTGTTACATTATGCTGTATGTATGGGATTGTAAAGTTTCAAGCATTTGCCCGTGGACTAAAGATTAGGAAGTCTAATGTTGGATTTGAAATTCATCAGAAGTGCAGTCTATTTAAGCCTCTGGAGGGCAAACTTGGTGAGTCAGTTGGTATTTCCACAAAAATTTCGAAGTTGTCTGCAAATACTTTCATCCATAAGCTTCAGGCTTCATCAATTACAATAATGGCACTGCGCTTGCAATATGTTAGTGGAGATCCAAATTCAGTGTTAAGTTGGTTGGAGCGCTGGTCAGCATCTTACTTTTGGAAACCAGTTCCCCAACCTAAGAAAATTCGAGACTATAAATCTCAAAGAAAGCAGGGTAATATTTCAAATGGAGAAGTTCAAATTTCCAAGTCAAGACGCACTAACCGGAAGCTTCCTGTCGCAAGTTTTGATCCAGTCCCACTGCAAACAAATCCTGAATTTGAGAAACCAAAACGTAATTTCAGGAAAACACCATACCAAGTGTCAGATCAAGAGCAAGACAATCCACAAAGTGAGCTTGAAAAGGTTAAACGTAACTTGAGAAAGATTAATAACCCTGTTGTTGAGAATGCTGTTCAGCCAGAAGTTGAATCTGAGACTCTAAAGCAGCATTTGGAAATTACAACAGTTATTCCAGATTATGCTTGTTCAGAACAAGCAATCATTACTTCTGAGGAAAAGATCAAGAAGGAAGAAACTTTGACTGTCTCCAATGTGCCTGATGTCGAAATTACACCAAGACCATCAGTTAACAAGGAAGTGTCTGACATTCCAAACAGTTATCAAGTGTCTGTAGAATCTAAACCCTTGTCAGAGACCACAACTAAAGATAGAAACACTTCTCGTGATGAAGTTAAAAACGAGCTAGGCAATCAACCAGAGGATATTTTTAAAGAAGACAACTCCCTATTAACAAATGGAGATTTGAATCATAAAGATCTGACAGGTAATGAAAACCAGAAACCTACTCGTAAAGCATCAAATTTGATTAAACAGGAGAATGGAGGACATGGCTTAAAGAATAGTCCAAAAGTACCAAGTTATATGGCAGCAACTGAATCCGCAAAGGCAAAGTTGAGGGCACTAGGGTCCCCAAGGTTTGGAGAAGATGGAATTGAGAAAAACAGCACTGCTGATTCTGGGAGACATTCTCTGCCAGCTTCAACTGGCAACAAGATTAGTTCGCATTCACCTAGGTCACAGAGATCAGCTCAAGCAGGTGGCAAAGGGAGTAACAAAAGTGACAGATCAATGACATCTTCTAAAGGAGGGAATGGGAAAGTAATTCAAGCAGAATGGAAGAGGTGA 2019 0.4052 MPHIPQTRHSAREIRISTQGHQSHFAIKELAHLVPNSHFQFHLFHGIVRFETRRFHVSQICWVFVSCLLLVTVIVEVFVKIPVGCNLRMGKSPGKWIKTVLFGKKSSRSNMSKGREIVNKREAVVASNVLENGLALDPNHNEIATNEEDLELENEESEVILPENQERESIGPVDPYAPPDPEKIRQEVAAIKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCCMYGIVKFQAFARGLKIRKSNVGFEIHQKCSLFKPLEGKLGESVGISTKISKLSANTFIHKLQASSITIMALRLQYVSGDPNSVLSWLERWSASYFWKPVPQPKKIRDYKSQRKQGNISNGEVQISKSRRTNRKLPVASFDPVPLQTNPEFEKPKRNFRKTPYQVSDQEQDNPQSELEKVKRNLRKINNPVVENAVQPEVESETLKQHLEITTVIPDYACSEQAIITSEEKIKKEETLTVSNVPDVEITPRPSVNKEVSDIPNSYQVSVESKPLSETTTKDRNTSRDEVKNELGNQPEDIFKEDNSLLTNGDLNHKDLTGNENQKPTRKASNLIKQENGGHGLKNSPKVPSYMAATESAKAKLRALGSPRFGEDGIEKNSTADSGRHSLPASTGNKISSHSPRSQRSAQAGGKGSNKSDRSMTSSKGGNGKVIQAEWKR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02277 672 MobiDBLite consensus disorder prediction 598 672 - -
Phco7g02277 672 Gene3D - 185 232 - -
Phco7g02277 672 ProSiteProfiles IQ motif profile. 186 214 IPR000048 GO:0005515
Phco7g02277 672 MobiDBLite consensus disorder prediction 346 366 - -
Phco7g02277 672 MobiDBLite consensus disorder prediction 615 663 - -
Phco7g02277 672 MobiDBLite consensus disorder prediction 508 532 - -
Phco7g02277 672 ProSiteProfiles IQ motif profile. 210 232 IPR000048 GO:0005515
Phco7g02277 672 SMART iq_5 185 207 IPR000048 GO:0005515
Phco7g02277 672 SMART iq_5 208 229 IPR000048 GO:0005515
Phco7g02277 672 MobiDBLite consensus disorder prediction 340 390 - -
Phco7g02277 672 MobiDBLite consensus disorder prediction 489 507 - -
Phco7g02277 672 Pfam Protein of unknown function (DUF4005) 573 651 IPR025064 -
Phco7g02277 672 MobiDBLite consensus disorder prediction 483 582 - -
Phco7g02277 672 PANTHER IQ-DOMAIN 5-RELATED 89 631 - -
Phco7g02277 672 Pfam IQ calmodulin-binding motif 210 227 IPR000048 GO:0005515
Phco7g02277 672 Pfam IQ calmodulin-binding motif 189 207 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02277 Phco-Chr7 40107027 40114358 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01322 8 13770004 13781894 Phco7g02277 7 40107027 40114358 ECH
Phco7g02277 7 40107027 40114358 Phco7g02277 7 40107027 40114358 ECH