Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01286 ATGAAAAGAGGGAGAATAGGCAAGTTAGATACTATTTTCACATTCACCAGACAACGATCCACTCAGATTCTCATCGTTCTTGCGCTCTTCTACGCTCTCTTCGTCTCCGTCGAGATCCCCTTCGTCTTCAGAACCGTTCAAGAACAACCGTCTCGCCTCCCGCCACTCGTTCGCCACCCAAACGGCGTCGTCTCCGGTTTGATCCTAAACGACGCCACATTCGATTCCTTCCTCTACCAATCCGCCTGCCGCGTCGGCAAGGATCTTTGGGCCGAACTTCAATCAGGCAACGCGCAGGCCCCCGTTTCCAAGCCCGATAACAGATCCAGGCCCTGCCCCGAGTCCATATGGGTATCCGGGCCCGAGTTTTTGGGCCGCGGGAGTTCGATGGTGATTCCCTGTGGGCTCACGTTAGGGTCCCATGTAACGGTGGTTGGGGAGCCGTTAAGAGCGCAACGGAAGGCGTGCCAGTTTGTGATGGAGTTGCAGGGGCTGAAGACGGTGGAGGGTGAAGAACCACCTAGGGTCTTACATTTGAATCCTAGGTTGAGAGGGGATTGGAGTGGGAAGCCTGTGATTGAACTCAACACGTGTTACCGCATGCATTGGGGTACTGCAATACGCTGTGATGGTTGGAAATCCAGAGCTGGTGAAGATACTGTTGATGGGTTGGTGAAATGTGAGAAGTGGATTAGGGCTGATGATGATGACAGGCATGCAGTGGAGACCAAGGTAGAGTGGTGGTTGAAGAGATTGATTGGTCGGACAAAACGAGTAACAGTTGATTGGCCATTTCCATTTTCTGTGAACAAGCTATTTGTTCTTACTGTCAGTGCAGGGTTGGAGGGCTACCATATTAATGTTGATGGGAGGCATGTCACCTCTTTTCCTTATAGCACTGGCTTTACTCTTGAGGATGCCACTGGTCTTACTTTGAGCGGGGACATTAATGTCCATTCTGTATTTGCTGCTTCTTTGCCATCGGTGCATCCCAACATTTCCCCGCAGCAGCAGCTTGAATTTTCAACCAGATGGCGTGCCCCAAATCTTCCTCCCTTTGGCGTGGAATTGTTCGTTGGGATACTTTCAGCTGGAAACCATTTTGCTGAGCGGATGGCTGTGAGGAAGTCATGGATGCAGCATAGCTTTATCAGATCTTCGAAAGTGGTTGCTCGCTTCTTTGTAGCACTGCACCCGAGGAAGGAAATTAACGTGGAGTTGAAGAAGGAAGCAGAATATTTTGGTGATATTGTTATAGTTCCTTACATGGATAACTATGACCTTGTTGTGCTGAAAACGGTGGCCATATGTGAGTACGGGGTTCGCACTGTTTCCGCGGAGTATATCATGAAGGGAGATGATGACACTTTTGTAAAAGTTGATGATGTTATGACTCGAGCAAGGAATGTTCCTTATTCTATGAGCTTTTATATAGGGAACATCAATTACCGCCACACACCCTTGCGCCGTGGTAAATGGGCCGTGACATATGAGGAGTGGCCAGAAGAGGAATATCCACCCTATGCTAATGGACCGGGTTATATTTTGTCTTCTGATATTGCTAGCTACATTTTATCTGAATTTGAGATGCATAAATTAAGGTTGTTTAAAATGGAAGACGTGAGTATGGGAATGTGGGTACAACAATTTAACAGAACAAAACCAGTATACTATTTGCATAGCTTGAAGTTCTGCCAGTTTGGTTGTGTGGAAGGCTATATCACAGCCCATTACCAATCGCCTAGGCAGATGATGTGCCTGTGGGATAAATTGCAGATTCAGACAATTCCTGAGTGCTGCAACATGAGATAA 1812 0.4768 MKRGRIGKLDTIFTFTRQRSTQILIVLALFYALFVSVEIPFVFRTVQEQPSRLPPLVRHPNGVVSGLILNDATFDSFLYQSACRVGKDLWAELQSGNAQAPVSKPDNRSRPCPESIWVSGPEFLGRGSSMVIPCGLTLGSHVTVVGEPLRAQRKACQFVMELQGLKTVEGEEPPRVLHLNPRLRGDWSGKPVIELNTCYRMHWGTAIRCDGWKSRAGEDTVDGLVKCEKWIRADDDDRHAVETKVEWWLKRLIGRTKRVTVDWPFPFSVNKLFVLTVSAGLEGYHINVDGRHVTSFPYSTGFTLEDATGLTLSGDINVHSVFAASLPSVHPNISPQQQLEFSTRWRAPNLPPFGVELFVGILSAGNHFAERMAVRKSWMQHSFIRSSKVVARFFVALHPRKEINVELKKEAEYFGDIVIVPYMDNYDLVVLKTVAICEYGVRTVSAEYIMKGDDDTFVKVDDVMTRARNVPYSMSFYIGNINYRHTPLRRGKWAVTYEEWPEEEYPPYANGPGYILSSDIASYILSEFEMHKLRLFKMEDVSMGMWVQQFNRTKPVYYLHSLKFCQFGCVEGYITAHYQSPRQMMCLWDKLQIQTIPECCNMR 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01286 603 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 128 324 IPR001079 GO:0030246
Phco8g01286 603 Gene3D - 128 223 - -
Phco8g01286 603 FunFam Hydroxyproline O-galactosyltransferase GALT2 238 322 - -
Phco8g01286 603 Pfam Galactosyltransferase 370 550 IPR002659 GO:0006486|GO:0016020|GO:0016758
Phco8g01286 603 SUPERFAMILY Concanavalin A-like lectins/glucanases 130 322 IPR013320 -
Phco8g01286 603 CDD GLECT 132 322 IPR001079 GO:0030246
Phco8g01286 603 FunFam Hydroxyproline O-galactosyltransferase GALT6 128 221 - -
Phco8g01286 603 Gene3D - 247 322 - -
Phco8g01286 603 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 337 553 IPR002659 GO:0006486|GO:0016020|GO:0016758
Phco8g01286 603 Pfam Galactoside-binding lectin 129 322 IPR001079 GO:0030246
Phco8g01286 603 Gene3D - 354 601 - -
Phco8g01286 603 FunFam Hydroxyproline O-galactosyltransferase 348 591 - -
Phco8g01286 603 SMART Gal_bind_lectin_2 132 323 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01286 Phco-Chr8 13467350 13470963 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01286 8 13467350 13470963 Phco8g01286 8 13467350 13470963 ECH
Phco8g01286 8 13467350 13470963 Phco7g02202 7 38881678 38884738 PCT