Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01274 ATGTCGTCATCACCGCAGAGCGTAAAGCAGAGCGTCTTCGCATGCTTAACCAAACTCTCCGACCGCGACACGCAGTCTCTCGCCGCCGCAGAACTCGAGTCTATCGCTCGGTGTCTCGATGCAGCCACTGTGCCGGCGTTTCTATCGTGCATGTACTCCACTGACGCGTCCGACAAGCCACCGGTCCGCAAGCAATGTGTGCAGCTCCTAGGGTTCCTCGCGGAGACGCACGGCAACATGCTCGCGCCGTACCTGTCTAAAATTATCGGCAGCGTTGTACGCCGCCTCCGCGACGCGGACTCGTCCGTGCGATCCACGTGCGTGAGTTCGGTTGCGGCATTGTCTCGGCACGTCAGCAGGCAGCCGTTGCATTCGTTCGTGAAGCCGTTGGCGGAGGCGCTGTTCACGGAGCAGGACCAGAACGCGCAGGCCGCCGCGGCGCTGTGTCTCGCCGCCGCTATTGATGGTGCTCCGGATCCGGACCCGGCCAGGCTGTCGAAGCTCCTGCCACGTTTCGAAAAGCTTCTGAAGCGCGACGGGTTCAAGGCGAAGCCCGGGCTGTTGACGCTCGTGGGAAGCGTCGTCGCGTCCGGCGGCGCGTCCGGTCACGCGCCGTTGAAGAGCTTGGTTCCGTGCTTGGTAGAGGCGTTGAGCAACGACGATTGGGCCACGCGGAAGGCCGCGGCGGAGACTCTCGTGGTGGTTGCCAACGTAGGGAGGGATTTCTTGTCGGAGTTCAAGGCCGAGTGTGTGACAGTTTTTGAGAATCGACGGTTTGATAAGGTAAAGTTAGTTCGGGACGTTATGAATCAGATGTTGGAAGCGTGGAAGCAGATTCCTGATGTTTCGGACGAAGTTACGCCACCTGCTAAATCACAATCTTCTTCTAAAGAGAATGCAAGTGATGGACGCTATCCTGCTGTCTCTCAAAATTCATGTAGTCCTGGTTCAGTGATGGCCAATCTACGGAAGAAAACTACACCTTTTAGCAGATTCAGTCAAGCAGATAGTTCTTCTGCTAGCGGTGCCAAGAATAGGAGTGCTTCAACTGGCAACAACAACAAGAGAACGAGTTCGATTGTTTCCCGAAAACTAAATCATAACAATTGGGATACTCAAGTTGCTGTGGCTGATCAGGGAGATCTTCAGGAGATGGATGGAATTGCTTTGGAAAGGATCAAAATGGATCAAAGCAGATTTTCAAAGCCAGAAATGAAGGGGGCACTGCTATATAGAGGTTCTGACGATAGAATACACAAGTATGGTGGGTCCAAAGCTGGATCTCGTGTGGTTCCATATCATGAAGAAAGTGAAGACTCAGTTCCTGTCAGTGGTGTCTCTAAAGATCTCCGTAGGAATGACAAAGAGAGTGAAGATTTATCGCTGATCCGCGATCAGCTACATCAGATTGAGAAGCAGCAGTCAAGTCTACTCGATCTTCTGCAGAAATTTATGGGAAGCTCACAAAATGGAATGCGTTCTTTAGAGACTCGTGTGCATGGCCTTGAGTTGGCATTGGATGAGATCTCTTATGATTTGGCTATATCTAGTGGAAGGATGACTAAATCTGATGTTCATGGCAACACATGTTGCATGCTACCTGGAGCAGAATTTTTAAGCTCCAAATTCTGGAGGAAAACACATGGCCGGCATTCGATCCCACGGTTCTCTAGATCAGGTGGCACTCCATCACTTGCTGCCATGAGCTACCAAGCCGACAAGAATGGTGAAACCAAGTTGACGAGCCATAGATTTAGGCCTGATGGAGGTTTCATCACTAATCCACTGGCAGAAATTCATGCAGATTCGAGGAATTTTGCTACATCGGAGCTAGTTTAA 1839 0.516 MSSSPQSVKQSVFACLTKLSDRDTQSLAAAELESIARCLDAATVPAFLSCMYSTDASDKPPVRKQCVQLLGFLAETHGNMLAPYLSKIIGSVVRRLRDADSSVRSTCVSSVAALSRHVSRQPLHSFVKPLAEALFTEQDQNAQAAAALCLAAAIDGAPDPDPARLSKLLPRFEKLLKRDGFKAKPGLLTLVGSVVASGGASGHAPLKSLVPCLVEALSNDDWATRKAAAETLVVVANVGRDFLSEFKAECVTVFENRRFDKVKLVRDVMNQMLEAWKQIPDVSDEVTPPAKSQSSSKENASDGRYPAVSQNSCSPGSVMANLRKKTTPFSRFSQADSSSASGAKNRSASTGNNNKRTSSIVSRKLNHNNWDTQVAVADQGDLQEMDGIALERIKMDQSRFSKPEMKGALLYRGSDDRIHKYGGSKAGSRVVPYHEESEDSVPVSGVSKDLRRNDKESEDLSLIRDQLHQIEKQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTKSDVHGNTCCMLPGAEFLSSKFWRKTHGRHSIPRFSRSGGTPSLAAMSYQADKNGETKLTSHRFRPDGGFITNPLAEIHADSRNFATSELV 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01274 612 Coils Coil 453 473 - -
Phco8g01274 612 FunFam TORTIFOLIA1-like protein 3 isoform A 1 358 - -
Phco8g01274 612 Pfam HEAT repeat 209 237 IPR000357 GO:0005515
Phco8g01274 612 SUPERFAMILY ARM repeat 7 269 IPR016024 -
Phco8g01274 612 Gene3D - 2 377 IPR011989 -
Phco8g01274 612 MobiDBLite consensus disorder prediction 287 363 - -
Phco8g01274 612 MobiDBLite consensus disorder prediction 283 363 - -
Phco8g01274 612 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 578 IPR033337 GO:0005874|GO:0008017
Phco8g01274 612 MobiDBLite consensus disorder prediction 423 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01274 Phco-Chr8 13345519 13348012 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01274 8 13345519 13348012 Phco7g02191 7 38769871 38772487 PCT