Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02191 ATGCCTCAAGCGAGAACGCAAACGCAGAACACAAAGCAGAGGGTCCTCACGTGCTTGACGAAGCTCTCAGACCGCGATACACAAGCTGCAGGAGCCACCGAACTCGAGTCCATTGCTCGTAGTCTGGACCCGCACTCTGTTCCCGTGTTCCTCTCTTGCATTCACTCCACCGACGCCTCCGACAAAACCCCTGTCCGCAAACAATGCGTGCACATCGTGGCCACGCTCTCCCAGGCGCACGGCGACGCGCTCTCGCCCTTCCTCTCCAGAATCCTCGCCAACCTCGTGCGTCGCCTCCGCGACCCCGACTCCTCCGTGCGGGCCGCCTGCGCCGACTCCGTCGGCGCTCTATCGGCGCGCGTCACTCGGCAGCCGTTCTCCTCCTTCCTGAAGCCCCTAGCGGAGGCGCTCTTCACAGAGCAGGACCCCAACTCGCAGGCCGCCGCGGCGCTCTGTCTCGCTTCTGCCGTTGACGGGGCTCCGGATCCGGACCCCACCAGGCTTGCCAGGCTGCTCCCAAGATTCGAGAAGCTTCTCAAGAGTAAGATGTTCAGGGCCAAGCCCGCGCTGCTGGCGCTCGTCGGAAGCGTCGTTGAGGCCGGCGGTGCGTCCAGTCGCGGCGCGTTGAGGAATTTGGTTCCCTGCCTTGTGGAGGCGCTCGGCAGCGTCGACTGGGCCACGAGGAAGGGCGCGGCGGAGGCGTTGAGGAGACTCGCCGTTGCGGAGAGGGACCTCTTGTCGGAATTCAAGGGTGGATGTTTCAGATTGCTCGAGGATCGGCGATTTGATAAGGTAAAGTTGGTTCGGGAAGTTATGAATCAGATGTTGGAGGCGTGGAAGCAGATTCCTGATGTTTCGGATGAGTTTTCTCCACCTCCTCACTCGCAGTCTTCTTCAAAAGAGAATGCAAGTGATGGGCGCTATCCTCCTGTGTCTCAAAATTCATGTAGTCCGGGTTCTGTTATGAGTAAATTGAGGAAGAAATCAAGCCCAATTAGCAAATCAACTCCACCGGATAGATCTCTTGCTGGGAATGCTAAAAAGTTGAGTGCCTTAAGTCGTGACCGGATGAGTTCAGGTGTTTTGCAGAAACTGAACCATAACCATTGGGATGTTAGAATTGCTGTGTCAAATGTTCCTGATCGTGGTGAATGTCAGCCGAGGGATGAAAATGTATTGGAAAGCAGCAAAAAGGATAAAAGCAGATTTTTCAAGTCAGAAACAAAACGGGCTCTGTTTGAGAAAAATTCTGATGACAAGATGCATAAATTTGGTGGGTCCAAAGCTGGATCTCGTGTGGTTCCTTGTTCAGAAGAGAATCAAGACTCAAGTCCTGTCTGTAATGTAGCAAAGGTTCTTCCTAGGAATGACAAAGAGAGTGAGGAATTATCTTTGATTCGTGCCCAGTTAGTTCAAATTGAGAAGCAGCAGTCAAGTCTGTTTGATCTTCTACAGAAATTCATTGGGAGCTCTGAAAATGGAATGCGTTCTTTAGAAACTCGTGTGCATGGCCTCGAGTTGGCATTGGATGATATATCTTATGATTTGGCTGTAACTAGTGGAAGGATAACTAAATCTGATGCTCCCAAGAATACATGCTGTCTGCTACCTGGTGCTGAATTTTTAAGCTCCAAATTCTGGAAGAAAACACAGATCCGATATTCATCCAACCGATTCTCTAGAACTGGTAGCACTCCATTACTAGCTTCCAGTCATTACAGAGCTAATAGGAGCACCGAATCTAGTACGACAAGCCACAGGTTTAGAGTCTGTGGTGATGGAACCTTCATCACAAATCCTCTGGCAGAGACTAAAATTAATTCACGGGAAATTTCAGGCTCTGCAAGATCGGAGCTAGCTTGA 1863 0.5148 MPQARTQTQNTKQRVLTCLTKLSDRDTQAAGATELESIARSLDPHSVPVFLSCIHSTDASDKTPVRKQCVHIVATLSQAHGDALSPFLSRILANLVRRLRDPDSSVRAACADSVGALSARVTRQPFSSFLKPLAEALFTEQDPNSQAAAALCLASAVDGAPDPDPTRLARLLPRFEKLLKSKMFRAKPALLALVGSVVEAGGASSRGALRNLVPCLVEALGSVDWATRKGAAEALRRLAVAERDLLSEFKGGCFRLLEDRRFDKVKLVREVMNQMLEAWKQIPDVSDEFSPPPHSQSSSKENASDGRYPPVSQNSCSPGSVMSKLRKKSSPISKSTPPDRSLAGNAKKLSALSRDRMSSGVLQKLNHNHWDVRIAVSNVPDRGECQPRDENVLESSKKDKSRFFKSETKRALFEKNSDDKMHKFGGSKAGSRVVPCSEENQDSSPVCNVAKVLPRNDKESEELSLIRAQLVQIEKQQSSLFDLLQKFIGSSENGMRSLETRVHGLELALDDISYDLAVTSGRITKSDAPKNTCCLLPGAEFLSSKFWKKTQIRYSSNRFSRTGSTPLLASSHYRANRSTESSTTSHRFRVCGDGTFITNPLAETKINSREISGSARSELA 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02191 620 SUPERFAMILY ARM repeat 12 376 IPR016024 -
Phco7g02191 620 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 9 577 IPR033337 GO:0005874|GO:0008017
Phco7g02191 620 Gene3D - 4 379 IPR011989 -
Phco7g02191 620 Coils Coil 456 476 - -
Phco7g02191 620 MobiDBLite consensus disorder prediction 290 340 - -
Phco7g02191 620 FunFam TORTIFOLIA1-like protein 3 isoform A 2 359 - -
Phco7g02191 620 MobiDBLite consensus disorder prediction 284 355 - -
Phco7g02191 620 ProSiteProfiles HEAT repeat profile. 91 129 IPR021133 -
Phco7g02191 620 Pfam HEAT repeat 92 118 IPR000357 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02191 Phco-Chr7 38769871 38772487 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02191 7 38769871 38772487 Phco7g02191 7 38769871 38772487 ECH
Phco8g01274 8 13345519 13348012 Phco7g02191 7 38769871 38772487 PCT