Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01243 ATGCGCTACATTCAGATTGAAACGAAGGAAAATGGTGGTGTGAAGTACTCAGATGAGTCATATCCTCAATCTCCTTTCTCAGAATACCAAGCTCCTAATGACGGCAACACTACCAACGAGAAAGAAACAACAACGCCATCATCTCTCAGCAGAATCAGTCCACTCATTTTGCTGGTCATAATTGTTCTAGCAGTTATCTTCTTTGTGTATGGACTTGTCCATTTGGTTCTATGGTTTTTCATGAAAACACCAACCTCTTCATCAATCTACAACTCCAACAGGTTCCACGAATCCACGCGCTCACGCGTTCTTCAGAGGCAGCTTCAACAACTCTTCCGCTTGCACGACTCAGGTCTAGACCAAGCCCTCATAGACGCTCTACCCGTTTTCCGTTACCAAGACTTATTGGGTTCAAAGGAACCGTTTGATTGTGCCGTGTGTTTATGCGAGTTCTCCGAGGACGACAAGCTGAGGTTGCTTCCTATGTGCACACACGCGTTTCACATGAACTGTCTTGACACTTGGCTTCTCTCGAATTCCACGTGTCCTCTTTGCAGGGCATCTCTCTCTAACTACGTGGAGAATCAGAATCAGAATCAAAATCAGAATCCAATGTTGTTTAATGTTGGCATTGGCAATTCAAATTGTTTGGTTCTGCCAAGTGGGTTCAGTGGTGAGGAAGAGAAGGGGTTTTCAGAGAGTGAAAGATCAGTTGGGAAAAGGGTGTTTTCTGTGAGGCTTGGAAAATTCAGAAACAATGGGTTGGAGTTAGAGAGTGGAGATAGTTGTAGTTTGAATGAGAGGAGATGCTACTCCATGGGTTCATATCGGTATGTGGTTCGTGATTCGAATCTGCAAGTGGTGTTGTCTGAATCTGGTGATGTTTCAGAAAATGAGAATGTGAAGGGAAAGAGGATAAGCGACTCAACCAAAGGTGAGAGCTTCTCTGTTTCCAAGATATGGCTTTGGTCCAAGAACCCCACATTTCATGCTTCTAATGCAGCTTTCCCCTAA 1014 0.4428 MRYIQIETKENGGVKYSDESYPQSPFSEYQAPNDGNTTNEKETTTPSSLSRISPLILLVIIVLAVIFFVYGLVHLVLWFFMKTPTSSSIYNSNRFHESTRSRVLQRQLQQLFRLHDSGLDQALIDALPVFRYQDLLGSKEPFDCAVCLCEFSEDDKLRLLPMCTHAFHMNCLDTWLLSNSTCPLCRASLSNYVENQNQNQNQNPMLFNVGIGNSNCLVLPSGFSGEEEKGFSESERSVGKRVFSVRLGKFRNNGLELESGDSCSLNERRCYSMGSYRYVVRDSNLQVVLSESGDVSENENVKGKRISDSTKGESFSVSKIWLWSKNPTFHASNAAFP 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01243 337 ProSiteProfiles Zinc finger RING-type profile. 144 186 IPR001841 -
Phco8g01243 337 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 47 321 - -
Phco8g01243 337 FunFam RING-H2 finger protein ATL46 106 191 - -
Phco8g01243 337 SMART ring_2 144 185 IPR001841 -
Phco8g01243 337 SUPERFAMILY RING/U-box 123 198 - -
Phco8g01243 337 Pfam Ring finger domain 143 186 IPR001841 -
Phco8g01243 337 CDD RING-H2_EL5-like 143 186 - -
Phco8g01243 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 196 IPR013083 -
Phco8g01243 337 MobiDBLite consensus disorder prediction 14 46 - -
Phco8g01243 337 MobiDBLite consensus disorder prediction 17 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01243 Phco-Chr8 13019950 13020963 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01243 8 13019950 13020963 Phco8g01243 8 13019950 13020963 ECH
Phco8g01243 8 13019950 13020963 Phco3g01530 3 18952856 18954016 ECH