Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00841 ATGAGTGCTGTACTATGCTTGCAGAATTCAACAATGATTGCAATGGGAGGTGGATGCCTGGAGAAGAAATATGTTATTGATGGTGGAAGCGAAAAGATGGGAAGAAACATGAGATTGAAGATTGGAGATTGGAGATTGGAAATTCGAAATTGGAGAAGGGGGAAAAGAGGTAAGGAGGAGGGTATGAATGATTACAAAGGAAGAGAAGGAGAAAGTGTTGTTGTTCGGAAGCGAATCAAGGAGAAGACGCAGCAGCAACAACAACAACAACCCTCTCCTTCCACTGCAAGGCCAAACAACTCTCACCGTCGCTCTCTCTCCCTCCCTAACAACAATCAACACGAGGAATCTGATACAGATATTGAAGGATCTGATGTTAGTGTCTCGGAAGGGGATGACACATCTTGGATCTCATGGTTTTGCAATTTGAGAGGAAATGAATTCTTGTGTGAAGTTGATGATGATTTTGTACAAGATGATTTCAACCTCTGTGGATTAAGTAGTCAAGTGCCTTACTATGATTATGCATTGGATTTAATTTTGGATGTTGAGCCCTCCCACGGAGACATGTTCACAGAGGAACAGAATGAGTTAATTGAATCTGCAGCAGAGATGCTTTATGGCCTGATTCATGCCCGGTACATTTTGACAAGCAAAGGAATGGCTGCAATGCTTCACAAGTTCAAAAACTTGGACTTTGGCAGATGTCCAAGAGTTTATTGCTCTGGACAGCCCTGCCTTCCAGTTGGCCAGTCAGATATTCCTAGGTCAAGTAATGTAAAAATATATTGCCCCAAGTGTGAAGACACTTACTACCCAAAGTCCAAGTATCAAGACATGGATGGAGCTTATTTTGGAGCTACATTTCCTCACCTCTTTCTGATGACTTACGGGAATCTGAAGCCACAAAAGCCATCACAGAACTATGTACCAAGAGTTTTTGGTTTCAAAGTTCACAAGTCCTGA 966 0.4224 MSAVLCLQNSTMIAMGGGCLEKKYVIDGGSEKMGRNMRLKIGDWRLEIRNWRRGKRGKEEGMNDYKGREGESVVVRKRIKEKTQQQQQQQPSPSTARPNNSHRRSLSLPNNNQHEESDTDIEGSDVSVSEGDDTSWISWFCNLRGNEFLCEVDDDFVQDDFNLCGLSSQVPYYDYALDLILDVEPSHGDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLHKFKNLDFGRCPRVYCSGQPCLPVGQSDIPRSSNVKIYCPKCEDTYYPKSKYQDMDGAYFGATFPHLFLMTYGNLKPQKPSQNYVPRVFGFKVHKS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00841 321 SMART CK_II_beta_2 135 317 IPR000704 GO:0005956|GO:0019887
Phco8g00841 321 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 128 232 IPR016149 GO:0005956|GO:0019887
Phco8g00841 321 ProSitePatterns Casein kinase II regulatory subunit signature. 236 267 IPR000704 GO:0005956|GO:0019887
Phco8g00841 321 Gene3D - 233 306 - -
Phco8g00841 321 MobiDBLite consensus disorder prediction 80 129 - -
Phco8g00841 321 PRINTS Casein kinase II regulatory subunit family signature 232 253 IPR000704 GO:0005956|GO:0019887
Phco8g00841 321 PRINTS Casein kinase II regulatory subunit family signature 281 298 IPR000704 GO:0005956|GO:0019887
Phco8g00841 321 PRINTS Casein kinase II regulatory subunit family signature 135 151 IPR000704 GO:0005956|GO:0019887
Phco8g00841 321 PRINTS Casein kinase II regulatory subunit family signature 254 275 IPR000704 GO:0005956|GO:0019887
Phco8g00841 321 PRINTS Casein kinase II regulatory subunit family signature 152 166 IPR000704 GO:0005956|GO:0019887
Phco8g00841 321 PRINTS Casein kinase II regulatory subunit family signature 207 228 IPR000704 GO:0005956|GO:0019887
Phco8g00841 321 FunFam Casein kinase II subunit beta 128 232 - -
Phco8g00841 321 FunFam Casein kinase II subunit beta 233 304 - -
Phco8g00841 321 Pfam Casein kinase II regulatory subunit 135 317 IPR000704 GO:0005956|GO:0019887
Phco8g00841 321 PANTHER CASEIN KINASE II SUBUNIT BETA 114 320 IPR000704 GO:0005956|GO:0019887
Phco8g00841 321 SUPERFAMILY Casein kinase II beta subunit 133 320 IPR035991 GO:0005956|GO:0019887
Phco8g00841 321 MobiDBLite consensus disorder prediction 84 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00841 Phco-Chr8 8572095 8576756 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00841 8 8572095 8576756 Phco4g01292 4 11086260 11088868 PCT