Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00837 ATGTCCAACATCCACACTGCAACCAACAGCATGAAAAAGTTGTCGAGTTATTTGCATTCCCTATCCCAAACCCCTCACAGGCTCAGAAAAAGAATGCTAGCCACATGGACCCCAGACCAGGAATTCAACCAAGTGAGGCACAGATCTGGGGCTGACATGAAGAGGAAGCTCAACTGGTACGATCTGGTTGCTCTTGGTGTTGGAGGAATGCTTGGTGTTGGTGTCTTTGTCACAACTGGCTCCGTTGCCCTTCACCACTCTGGTCCTTCAGTCTTCATTTCCTATATCATAGCAGGAATTTCAGCCCTTCTCTCCTCCTTGTGTTACACTGAATTTGCTGTACAAGTCCCAGTTGCAGGAGGAGCTTTCAGTTATTTAAGATTAACATTTGGGGAATTCTCGGGATATTTTGCTGGGGCAAATATACTACTGGAGTATGTGTTCTCAAACGCTGCCGTAGCAAGGAGCTTTACAGAATATTTGAGCATTGCGTTTGGAGAAAATGATCCAAATGTGTGGAGAGTGGAAGTCCATAGCTTGCCCAAGGATTATAACATGTTGGATTTTCCAGCTGTGGCTGTCATTCTTATTCTTACTCTCTTCTTGTGTCATAGTACAAAGGAAAGCTCCATGTTGAACCTCATTATGACAGCCTTCCATGTGATTTTTTTTGGATTCATTATAATCGCTGGTTATTGCAATGGAAGTGCCAAAAACTTCGTTAATCCAAAAGGTCTAGCCCCTTTTGGTGTTAGAGGTGTTCTTGATGGAGCAGCAATAGTCTACTTCAGTTATATAGGCTATGACTCCGCTTCAACCATGGCTGAGGAGGTCAAAGACCCTTTTAAGAACCTACCCATTGGAATTGTGGGTTCAGTTCTTACAACCACTTTGCTGTATTGCTTAATGTCTGTGTCTTTGTGCATGATGGTTCCTTACAACAAGATATCCGAGAAAGCATCATTTTCAATAGCTTTTCTCAGAATTGGTTGGAGTTGGGCGAGCAATCTAGTAGGGGCAGGTGCAAGTTTGGGCATAGTGGCTTCTCTCTTGGTTGCCATGCTAGGCCAAGCAAGATACCTTTGTGTTATTGGAAGGGCAAGGTTGGTTCCATCTTGGTTAGCCAAAGTACACCCTTCAACAGGCACACCATTGAATGCGACGGTCTTTTTGGGAATTTGCACAGCGTGTATTGCACTATTCACGGAGCTTGACATTATAATTGAGTTGATAAGCATCGGCACGCTGTTGGTGTTCTACATGGTAGCCAATGCTCTTATATACCATCGATATGTAATCACTGGGCATACTCCAACTTCGCACACTCTTTTGTTCCTTTTTCTCCTTTCTCTAAGTGCACTATGCTTCTCCATTGCGTGGAAATTCAAGCAGCAATGGTGGGGTCTTGTACTTTTTGGTGGGTTTATGATCGCCATCACTGCCTTCTATCAACACGTGGTGCTTAATGCTACCACTGCCCAACATGCTCAACAGCAACATTGGTCCGTGCCATTCATGCCATGGCCACCCTCCATGTCCATCTTTCTTAACGTTTTCCTCATAACCACGCTCAAAACCCTCTCTTTCCAACGCTTTGCCATATGGGCATGCCTCATCACCATCTTCTATGTGCTCTATGGCGTTCACAACACTTATGAGGCAGAGGAGATTGAGATGGGTGGTGTAAGTGTTGGTGGTGATGAAGTGAATTCAGGTGTACACAACTTGCAAACCAAGGTGGAAATTCAAGTGCATTAG 1758 0.4448 MSNIHTATNSMKKLSSYLHSLSQTPHRLRKRMLATWTPDQEFNQVRHRSGADMKRKLNWYDLVALGVGGMLGVGVFVTTGSVALHHSGPSVFISYIIAGISALLSSLCYTEFAVQVPVAGGAFSYLRLTFGEFSGYFAGANILLEYVFSNAAVARSFTEYLSIAFGENDPNVWRVEVHSLPKDYNMLDFPAVAVILILTLFLCHSTKESSMLNLIMTAFHVIFFGFIIIAGYCNGSAKNFVNPKGLAPFGVRGVLDGAAIVYFSYIGYDSASTMAEEVKDPFKNLPIGIVGSVLTTTLLYCLMSVSLCMMVPYNKISEKASFSIAFLRIGWSWASNLVGAGASLGIVASLLVAMLGQARYLCVIGRARLVPSWLAKVHPSTGTPLNATVFLGICTACIALFTELDIIIELISIGTLLVFYMVANALIYHRYVITGHTPTSHTLLFLFLLSLSALCFSIAWKFKQQWWGLVLFGGFMIAITAFYQHVVLNATTAQHAQQQHWSVPFMPWPPSMSIFLNVFLITTLKTLSFQRFAIWACLITIFYVLYGVHNTYEAEEIEMGGVSVGGDEVNSGVHNLQTKVEIQVH 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00837 585 PIRSF AA_transporter 433 562 - -
Phco8g00837 585 PIRSF AA_transporter 34 490 - -
Phco8g00837 585 Gene3D Amino acid/polyamine transporter I 52 496 - -
Phco8g00837 585 Pfam Amino acid permease 57 467 IPR002293 GO:0016020|GO:0022857|GO:0055085
Phco8g00837 585 Pfam C-terminus of AA_permease 501 550 IPR029485 -
Phco8g00837 585 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 32 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00837 Phco-Chr8 8516341 8520436 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01300 4 11131333 11133773 Phco8g00837 8 8516341 8520436 PCT