Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01300 ATGGCTAACACTGCAACCAACAACAAGACAACTTTGTCAAGTTATTTCCATTCCCTTTCTCAAACTCCTCAAAGACTGAAAAAGAGAATGCTAGCCACTTGGACCCCTGACCAGGAACTCAACCAAGTGAGGCAAAGGTCTGGAGCAGACATGAAAAGGAGTCTCAAGTGGTATGATCTGGTAGCCCTTGGACTAGGTGGAATGCTAGGTGTTGGTGTGTTTGTTACAACTGGTTCTGTAGCCCATCATCAATCTGGTTCTTCAGTTTTCATATCCTATATTATAGCAGGACTATCAGCTCTTCTCTCCTCTTTATGTTACACTGAATTTGCTGTTCAAGTTCCAGTAGCAGGAGGAGCTTTCAGCTATTTAAGATTAACCTTTGGAGAATTTGTGGGGTACTTTGCTGGGGCAAATATACTAATGGAGTATGTGTTTTCTAATGCTGCTGTATCAAGGAGTTTCACAGAGTATTTGAGCTTTGCATTTGGCGAAAATGATCCAAACGTGTGGAGAGTGAAACTGCATGGATTGCCAAAGAACTATAACATGTTGGATCTCCCAGCTGTTTCTCTTATTCTTATTCTCACTCTCTGCTTGTGCTATAGTACCAAGGAAAGTTCTATATTGAACCTCATCATGACAGTCTTCCATGTGATTTTCTTCGGATTTATCATTGTGAGTGGTTATAGCACTGGAAGTGTAAAAAACTTGGTGAGTCCAAAAGGGTTAGCACCTTTTGGTATGAGAGGTGTTGTGAATGGAGCAGCTAAAGTCTACTTCAGCTACATAGGGTATGACTCGGCTTCAACATTGGCAGAGGAAATCAAAGATCCTTCTAAGAGTCTACCTATTGGAATTGTTGGTTCAGTTCTGATAACCACAGTGCTCTATTGCCTTATGTCTCTATCTTTGTGCATGATGGCTCCTTATAACAAGATATCAGATAAATCATCATTTGCATTTGCTTTTGCTAAGATTGGAGGGATGTGGGAGAGCAACCTTGTTGGGGCAGGTGCAAGTTTGGGAATAGTGGCTTCTCTCTTGGTTGCCATGTTAGGCCAAGCTAGATACCTTTGTGTCATAGGAAGGGCCCGACTGGTGCCATCTTGGTTGGCTAAAGTTCATCCTTCTACAGCCACCCCATTGAATGCCACACTCTTTTTGGGAGTTTGCACAGCATCTGTTGCTCTTTTCACTGATCTTGACATTATAATCGAGTTGATCAACATGGGGACACTCGTGGTGTTCTACTTGGTGGCCAATGCTCTCATATACCGTCGATACGTAATCACTAGCCATACCCCTCCTTTCTACACTCTCCTTTTCCTCCTTCTCTTTTCACTTAGTGCTCTGGGCTTCTCCCTTTCGTGGAAATTCAATCTGCTACGCTGGGGTCTTCCACTCTTTGGTGGGCTCATGATCACTATCACAGCTTTTTACCACCACCAGGTGCCTCACACCCATGCCCAACTTGCTCATACTGATTGGTGTGTGCCATTCATGCCCTGGCCACCTGTCCTTTCCATCTTTCTCAATCTTTTCCTCATCACCACTCTAAAGCTCCTTGCTTTCCAAAGGTTTGCTATGTGGGCATGCTTCATTACCCTCTTCTATCTACTCTATGGTGTTCACTCCACTTACCAAGCAGAAGAGATTGAGATTGGTGCTAATCAAGTCAATTCAACCTCAACCAACGGACAAACCAATAAGGTAGAACTTCAAGTGCTCTAG 1734 0.4348 MANTATNNKTTLSSYFHSLSQTPQRLKKRMLATWTPDQELNQVRQRSGADMKRSLKWYDLVALGLGGMLGVGVFVTTGSVAHHQSGSSVFISYIIAGLSALLSSLCYTEFAVQVPVAGGAFSYLRLTFGEFVGYFAGANILMEYVFSNAAVSRSFTEYLSFAFGENDPNVWRVKLHGLPKNYNMLDLPAVSLILILTLCLCYSTKESSILNLIMTVFHVIFFGFIIVSGYSTGSVKNLVSPKGLAPFGMRGVVNGAAKVYFSYIGYDSASTLAEEIKDPSKSLPIGIVGSVLITTVLYCLMSLSLCMMAPYNKISDKSSFAFAFAKIGGMWESNLVGAGASLGIVASLLVAMLGQARYLCVIGRARLVPSWLAKVHPSTATPLNATLFLGVCTASVALFTDLDIIIELINMGTLVVFYLVANALIYRRYVITSHTPPFYTLLFLLLFSLSALGFSLSWKFNLLRWGLPLFGGLMITITAFYHHQVPHTHAQLAHTDWCVPFMPWPPVLSIFLNLFLITTLKLLAFQRFAMWACFITLFYLLYGVHSTYQAEEIEIGANQVNSTSTNGQTNKVELQVL 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01300 577 Pfam C-terminus of AA_permease 497 546 IPR029485 -
Phco4g01300 577 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 38 547 - -
Phco4g01300 577 Pfam Amino acid permease 55 442 IPR002293 GO:0016020|GO:0022857|GO:0055085
Phco4g01300 577 Gene3D Amino acid/polyamine transporter I 50 484 - -
Phco4g01300 577 PIRSF AA_transporter 434 566 - -
Phco4g01300 577 PIRSF AA_transporter 32 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01300 Phco-Chr4 11131333 11133773 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01300 4 11131333 11133773 Phco8g00837 8 8516341 8520436 PCT