Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00722 ATGGAGTGGCCAGCATGTACGGATGAGTACGAGAAGCTAGTAATTCGCATGACTACTCCCAGGGTTGTCATTGATAATGCCGTGTGCTCCACCGCAACAATAGTCAAGGTTGATAGCGGCAGAAAAAACGGAATTCTTTTGGATGCCGTACAAGTGCTTTCTGATCTAAATCTTTCAATTAAGAAGGCTTACATTTCCTCCGATGGGAGGTGGTTCATGGATGTTTTCCACGTTACTGATCAAATCGGAAACAAGCTAACCGATCAGAGCGTTTTGAGTTATATTGAACAGTCACTTGGCGGAATTCACAGTGGGAATAATAATGTCTTAAAAGGTCTCACGATCCTTGAATTAACCGGCACGGACCGTGTTGGTCTTCTTTCGGAGGTTTTTGCTGTACTAGCTGAGCAGCAATGTGATGTGGTAAATGCTAAGGTTTGGACTCACAATGGCCGGATTGCCTCCTTAATCTATGTTAAAGACAGCAATTCTGGGACTCTTATCGAGGACTGTCAGAGAATTAGTACTATTGAAGCACGTTTAAGAAATGTTTTAAAGGGTGACAATGATATTAGAAGTGCAAAAACTTCCATCACTAATGCCGTTGTGCACACAGAACGAAAGCTGCACCAAATGATGTACACTGACCGTGATTACCAGAGGAATCCGATTTTCAACTTTACTTCTGATATCCCAGTAGTCACCGTCCAAAATTGGGCCGAAAGGGGTTATTCGGTTGTCAATGTGCAGTGCAAGGATCGAATTAAACTTTTGTTTGATGTTGTCTGTAATTTAACTGACATGGAATATGTTGTGTTCCATGGGACTGTTAAGACAACAGTTGACAAAGCGTATCTGGAGTTTTATATAAGACACAAGGATGGCACTCCAATTAGTTCAGAGCCAGAACGTCATCGTGTGATTCAATGCTTGCAAGCTGCAGTGGAGAGAAGGGCATTTGAGGGTGTTATGCTAGAGTTATGTACGGAAGATAGACAGGGGCTTCTAGCAGAAGTGATGAGAACTTTTCGGGAGAATGGGCTCAATGTGACAAGGGCGGATATATCTACCATTGGGGAAAAGACATCAAATGTTTTTTATGTAACGGATGCGATCGGATACCCTGCTGATCCAAAAATCATCGAATCTGTTAGGCAGAAAGTTGGATCGTGCAATTTAAAAGTGAAGGAGTTACCATTGGTATGCCATGAGAAGGCAGAAAGGGAAGATGAAGCAGTTGGGGTTGGTGGGGCAGTGTTGCTGTGTCTGGGGAGCCTCGTGAGAAGGAATCTATACAATTTGGGTTTGATAAAATCGTGCTCTTAA 1326 0.4291 MEWPACTDEYEKLVIRMTTPRVVIDNAVCSTATIVKVDSGRKNGILLDAVQVLSDLNLSIKKAYISSDGRWFMDVFHVTDQIGNKLTDQSVLSYIEQSLGGIHSGNNNVLKGLTILELTGTDRVGLLSEVFAVLAEQQCDVVNAKVWTHNGRIASLIYVKDSNSGTLIEDCQRISTIEARLRNVLKGDNDIRSAKTSITNAVVHTERKLHQMMYTDRDYQRNPIFNFTSDIPVVTVQNWAERGYSVVNVQCKDRIKLLFDVVCNLTDMEYVVFHGTVKTTVDKAYLEFYIRHKDGTPISSEPERHRVIQCLQAAVERRAFEGVMLELCTEDRQGLLAEVMRTFRENGLNVTRADISTIGEKTSNVFYVTDAIGYPADPKIIESVRQKVGSCNLKVKELPLVCHEKAEREDEAVGVGGAVLLCLGSLVRRNLYNLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00722 441 SUPERFAMILY ACT-like 322 394 IPR045865 -
Phco8g00722 441 CDD ACT_ACR_3 244 318 - -
Phco8g00722 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 396 IPR040217 -
Phco8g00722 441 Pfam ACT domain 324 375 IPR002912 -
Phco8g00722 441 Pfam ACT domain 114 163 IPR002912 -
Phco8g00722 441 CDD ACT_ACR_1 32 100 - -
Phco8g00722 441 ProSiteProfiles ACT domain profile. 115 196 IPR002912 -
Phco8g00722 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Phco8g00722 441 Gene3D - 113 186 - -
Phco8g00722 441 SUPERFAMILY ACT-like 29 100 IPR045865 -
Phco8g00722 441 SUPERFAMILY ACT-like 112 185 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00722 Phco-Chr8 7212045 7214523 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g03084 3 56960301 56962864 Phco8g00722 8 7212045 7214523 ECH
Phco8g00722 8 7212045 7214523 Phco8g00722 8 7212045 7214523 ECH