Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03084 ATGGATTGTTGGTCCTCTCCTCTGCCGCTTCATGATGAATTCGAGAAGCTTGTCATTCGAATGAACCCTCCAAGAGTTACTGTGGATAACGTTTCGAGCAGGACAGACACTGTGATAAAGGTTGATAGCGCAAACAGGCGCGGGAGTTTGCTGGAAGTGGTTCAGGTTCTCACTGACATGAATCTCAGTGTTAGAAGAGCTTACATTTCCTCTGATGGAGAATGGTTCATGGATGTTTTTCATGTCACGGATCAAAATGGGAAAAAGTTTGAGCAAGATGATGTAGCTGACCGTATTCAACAGTCACTGGGTCCAAGAGCCTCTAGTTTCCGATCGTTGAGAAGATCTGTTGGGGTTCAAGCTGAAGCAGAACATACAACAATTGAATTAACCGGAAGAGACAGGCCAGGGTTGCTTTCAGAAGTTTTTGCTGTTCTTGCAGACCTCAAATGCAATGTGGTAGCAGCAGAAGTCTGGACACACAATTCAAGAATGGCATCTGTTGTTTACATCACAGATGAGGCGACAGGATTGTCCATCGACAATCCGGATCGCCTTGCTAAGATTAAGCAGCTTCTATTGTATGTGCTGAAAGGAGACATAGATAAGAAGAGTGCCAATACTGCTGTTTCTGTTGGTTCTACTCACAAGGATAGGAGGCTGCATCAGTTGATGTATGCGGACCGTGATTATGACATAGACGATGGAGATTCTGGGTCAACGAGTGACAGGAACAAACTCCTTGTAACTGTTGACGATTGCATAGATAAGGGATACACTGTTGTGAACTTGAGGTGTCCGGATAGACCTAAGTTACTGTTTGATACCGTATGCACACTCACCGACATGCAGTATGTTGTGTACCATGGAACTGTCATTGCTGAAGGACCAGAGGCATATCAGGAATATTATATAAGGCATGTGGATGGATGTCCTATCAGTTCTGAAGCAGAAAGGCAAAGAGTGATTCATTGTTTGGAGGCCGCTATTAGGAGAAGAACTTCTGAGGGCATAAAGCTAGAACTATGTGGGGAGGACAGGGTTGGCCTTCTGTCTGATGTAACTCGTATCTTCAGAGAAAATGGCCTTTCAGTGAATCGTGCTGAAGTTACAACCAGGGGCACTCAAGCTATGAATGTTTTCTATGTGACTGATGTGACCGGAAATCCAGTTAAGAGTGAAACAATTGAAGCAGTTCGAAAAGAGATTGGCTTGGCCATACTGCATGTCAAAGATGATGTATGCTCAAAACCTCCACCCCATGAGAGAGGAAAATTCTCTTTGTCTGGTCTCTTTCGATCAAGCTCTGAGAAGTTTCTTTGCAACTTGGGTCTAATGAAGTCTTATTCTTGA 1353 0.4405 MDCWSSPLPLHDEFEKLVIRMNPPRVTVDNVSSRTDTVIKVDSANRRGSLLEVVQVLTDMNLSVRRAYISSDGEWFMDVFHVTDQNGKKFEQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDNPDRLAKIKQLLLYVLKGDIDKKSANTAVSVGSTHKDRRLHQLMYADRDYDIDDGDSGSTSDRNKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHVDGCPISSEAERQRVIHCLEAAIRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLSVNRAEVTTRGTQAMNVFYVTDVTGNPVKSETIEAVRKEIGLAILHVKDDVCSKPPPHERGKFSLSGLFRSSSEKFLCNLGLMKSYS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03084 450 SUPERFAMILY ACT-like 335 404 IPR045865 -
Phco3g03084 450 CDD ACT_ACR_4 337 408 - -
Phco3g03084 450 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 11 411 IPR040217 -
Phco3g03084 450 ProSiteProfiles ACT domain profile. 38 118 IPR002912 -
Phco3g03084 450 Pfam ACT domain 37 86 IPR002912 -
Phco3g03084 450 Pfam ACT domain 341 402 IPR002912 -
Phco3g03084 450 Pfam ACT domain 126 174 IPR002912 -
Phco3g03084 450 SUPERFAMILY ACT-like 35 104 IPR045865 -
Phco3g03084 450 Gene3D - 337 411 - -
Phco3g03084 450 CDD ACT_ACR_3 259 333 - -
Phco3g03084 450 ProSiteProfiles ACT domain profile. 339 417 IPR002912 -
Phco3g03084 450 SUPERFAMILY ACT-like 124 193 IPR045865 -
Phco3g03084 450 Gene3D - 125 196 - -
Phco3g03084 450 ProSiteProfiles ACT domain profile. 127 204 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03084 Phco-Chr3 56960301 56962864 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g03084 3 56960301 56962864 Phco3g03084 3 56960301 56962864 ECH
Phco3g03084 3 56960301 56962864 Phco8g00722 8 7212045 7214523 ECH