Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00647 ATGTCAGGAGCAGGGAAGTTGTTACAGAGAAATAACGGGAGAGAGATAAAGGGAGTAATGGCAATGGCAACAATGGAAGAGAGTCCTCGGAGCCCAGAAGCGAAATTGGGTATGCGAGTTGAGGATCTTTGGGACGTGCAAGAGGCACAGCTAAGTCCTACTGAGAAGCTCAACGCTTGTTTTGAGAGCATCCCTGTCTCTGCGTTTCCTCTAGCTCCTTCAAACCAAGAAATTGAGATCAAATCAGACGCCACCCTGGCCGAAGCTGTTATGAAACTGGCACGGCACAATGTTTTCAGTGCACCTGTGGTGGATGTTGATGCGCCTGAAGATGCTACTTGGATTGACAGATACATCGGAGTTGTTGAGTTTGCTGGAATTGTTGTATGGATCTTGCATCAGTCTGAACCTGCATCTCCTAGGAGTCCATCTACTCCATCCAGTGCAAGGGCTATTGCAGCTGCTGCTAATGGAGTGAGTTTTGCTCTAGAACTTGAAGCCTTAGGCCTTGGATCTGCTGCAGCAACTTCAGGAAACTTTTTTGAGGATCTTACTTCATCTGAACTTTATAAGAATACCAAGGTTCGTGACATTTCAGGGACATTCCGCTGGGCCCCATTTCTTGCTTTAGAGAGATCAAACTCATTTCTAACCATGCTCTTGCTGCTTTCTAAGTACAAGATGAAGAGTGTTCCTGTGTTGGATTTAGGCTCTGGTACAATTGATAAGATTATTACACAATCTGCTGTTATTCATATGCTGGCAGAATGCGCTGGACTTCAGTGGTTTGAAAGTTGGGGAACCAAAAAACTATCTGAAGTTGGTCTTCCCCTGGTTACACCAGATCAGATCATAAAGGTTTATGAGGATGAACCAGTCCTTCAAGCATTTAAAGTAATGAGAAAAAAGAGGGTGGGAGCGGTGCCTGTAATTGATAGAGATAGCAAAAAGGCAGTTGGTAACATAAACTTGCGAGACGTTCAATTCTTGCTAAATGCTCCAGAAATATACCATGATTATAGAGCTATTACAGTAAAGGACTTCCTGACAGCCGTTAGAAGTTACTTGGAGAAGAATAAAAACGCATTCCCAATGGTAAGTGAGTATGTTACATGCAGAGAGGACTGTACAATCAAAGAGTTGATTCAACTGCTTGATCAAGAGAAGATTCATAGGGTGTATGTGGTGGACGATGATGGGGATCTGCAAGGACTAATCACACTAAGAGACATAATCTCAAGACTAGTACACGAACCCCGTGGCTATTTTGGTGATTTCTTTGATGGTGTTCTACCTCTGCCTGCAAACACCAGAGTTTAA 1320 0.4356 MSGAGKLLQRNNGREIKGVMAMATMEESPRSPEAKLGMRVEDLWDVQEAQLSPTEKLNACFESIPVSAFPLAPSNQEIEIKSDATLAEAVMKLARHNVFSAPVVDVDAPEDATWIDRYIGVVEFAGIVVWILHQSEPASPRSPSTPSSARAIAAAANGVSFALELEALGLGSAAATSGNFFEDLTSSELYKNTKVRDISGTFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVLDLGSGTIDKIITQSAVIHMLAECAGLQWFESWGTKKLSEVGLPLVTPDQIIKVYEDEPVLQAFKVMRKKRVGAVPVIDRDSKKAVGNINLRDVQFLLNAPEIYHDYRAITVKDFLTAVRSYLEKNKNAFPMVSEYVTCREDCTIKELIQLLDQEKIHRVYVVDDDGDLQGLITLRDIISRLVHEPRGYFGDFFDGVLPLPANTRV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00647 439 Gene3D - 268 418 IPR046342 -
Phco8g00647 439 SUPERFAMILY CBS-domain pair 270 425 IPR046342 -
Phco8g00647 439 ProSiteProfiles CBS domain profile. 365 423 IPR000644 -
Phco8g00647 439 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 67 415 - -
Phco8g00647 439 ProSiteProfiles CBS domain profile. 279 340 IPR000644 -
Phco8g00647 439 Gene3D - 54 260 IPR046342 -
Phco8g00647 439 Pfam CBS domain 365 416 IPR000644 -
Phco8g00647 439 Pfam CBS domain 283 327 IPR000644 -
Phco8g00647 439 SUPERFAMILY CBS-domain pair 49 255 IPR046342 -
Phco8g00647 439 CDD CBS_pair_SF 282 412 - -
Phco8g00647 439 ProSiteProfiles CBS domain profile. 73 139 IPR000644 -
Phco8g00647 439 SMART cbs_1 283 332 IPR000644 -
Phco8g00647 439 SMART cbs_1 368 416 IPR000644 -
Phco8g00647 439 SMART cbs_1 76 132 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00647 Phco-Chr8 6468460 6471597 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00647 8 6468460 6471597 Phco8g00647 8 6468460 6471597 ECH
Phco8g00647 8 6468460 6471597 Phco7g01974 7 33475155 33478279 PCT