Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01974 ATGAGGAGCTATTTATGGGGACGTGTAAAGATTAGTTTTTTAGGATTGGTTTTAGAGAAAGAAAGAGTGAGAGTTATGGTGACAATGGAAGAGAGTCCACGGAGTCCAGAGGCGAAGGTGGGGTTGAGAGTGGAGGATCTGTGGGACGTTCAGGAGCCACAGCTAAGTCCTGATGAGAAGCTCAATGCTTGCTTTGAGAGCATCCCTGTCTCTGCCTTCCCTCTACCTCCTTCAAATCAAGAAATTGAGATAAAATCAGATACCACTCTAGCAGAAGCAGTGAAAATGCTTGCACAACACAACATTCTCAGTGCACCTGTGGTGGATGTAGATGCACCTGAAGATGCTAGTTGGATCGACAGATATATAGGAATAGTTGAGTTTGCTGGAATTGTTGTATGGATTCTGCATCAGTCTGAACCCACATCTCCTAGGAGTCCATCCAGTGGATCTGCTATTGCGGCTGCTGTGGATGGAAAAACTTCTGCTTTTGAACATGAAGCCTTAGGCCTTGAATCTGCCATGACAACTTCAGGAAATTTTTTTGAGGATCTGACTTCTTCTCAACTTTATAAGAATACCAAGGTTCGTGACATTTCAGGGTCATTCCGCTGGGCCCCCTTTCTCGCTTTGGAGAGATCGAACTCATTTTTGACCATGCTTTTGCTGCTTTCCAAGTACAAGATGAAGAGTGTTCCTGTTGTAGACTTAGGTGCAGGTCGAATTCAAAACATTATTACACAGTCTTCTGTAATTCACATGTTGGCAGAATGTGCTGGTCTTCAGTGGTTTGAGAGTTGGGGAACCAAGAAGCTCTCTCAAGTTGGTCTTCCCATCGTGGCACCAAATCATATTATAAAGGTTTATGAAGACGAACCAGTGCTTCAAGCATTTAAACTGATGAGGAAAAAGAGGATTGGGGGGTTGCCAGTGATGGAAAGGGGTGGCAGCAGGGCAATTGGTAACATAAGCCTGCAAGATGTTCAATTCCTCCTAACTGCTCCAGAAATCTACCATGACTATAGATCTATTACAGCAAAAGACTTCCTGACAGCCGTGAGAAGCTACTTAGAGAAGCATGAAGGGATCTTTACAATGTCAGGTGAACTGATTACATGCAATAAGGATTGCACAATCAAAGAACTGATTCAACTGCTTGACCATGAGAAGATTCATAGGGTCTACGTTGCTGACAATGATGGGAATCTTGAAGGACTGATTACGCTGAGAGATATCATCTCAAGGCTAGTGCATGAGCCCCGTGGCTATTTCGGTGATTTCTTTGATGGGGTTCTCCCGATGCCTCCAAACAGCAGGGTTTGA 1323 0.4414 MRSYLWGRVKISFLGLVLEKERVRVMVTMEESPRSPEAKVGLRVEDLWDVQEPQLSPDEKLNACFESIPVSAFPLPPSNQEIEIKSDTTLAEAVKMLAQHNILSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSEPTSPRSPSSGSAIAAAVDGKTSAFEHEALGLESAMTTSGNFFEDLTSSQLYKNTKVRDISGSFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVVDLGAGRIQNIITQSSVIHMLAECAGLQWFESWGTKKLSQVGLPIVAPNHIIKVYEDEPVLQAFKLMRKKRIGGLPVMERGGSRAIGNISLQDVQFLLTAPEIYHDYRSITAKDFLTAVRSYLEKHEGIFTMSGELITCNKDCTIKELIQLLDHEKIHRVYVADNDGNLEGLITLRDIISRLVHEPRGYFGDFFDGVLPMPPNSRV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01974 440 ProSiteProfiles CBS domain profile. 280 341 IPR000644 -
Phco7g01974 440 CDD CBS_pair_SF 221 328 - -
Phco7g01974 440 Gene3D - 64 261 IPR046342 -
Phco7g01974 440 CDD CBS_pair_SF 284 413 - -
Phco7g01974 440 SMART cbs_1 80 136 IPR000644 -
Phco7g01974 440 SMART cbs_1 284 333 IPR000644 -
Phco7g01974 440 SMART cbs_1 207 256 IPR000644 -
Phco7g01974 440 SMART cbs_1 369 417 IPR000644 -
Phco7g01974 440 SUPERFAMILY CBS-domain pair 279 426 IPR046342 -
Phco7g01974 440 Gene3D - 269 419 IPR046342 -
Phco7g01974 440 ProSiteProfiles CBS domain profile. 366 424 IPR000644 -
Phco7g01974 440 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 72 416 - -
Phco7g01974 440 SUPERFAMILY CBS-domain pair 55 256 IPR046342 -
Phco7g01974 440 ProSiteProfiles CBS domain profile. 77 142 IPR000644 -
Phco7g01974 440 Pfam CBS domain 366 417 IPR000644 -
Phco7g01974 440 Pfam CBS domain 285 328 IPR000644 -
Phco7g01974 440 Pfam CBS domain 82 127 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01974 Phco-Chr7 33475155 33478279 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01974 7 33475155 33478279 Phco7g01974 7 33475155 33478279 ECH
Phco8g00647 8 6468460 6471597 Phco7g01974 7 33475155 33478279 PCT