Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00510 ATGGCAGCTTCATACTGTGTTGAAGAGAGAAAAGCATGTGTGAGATGGGTGGAGAAATATTTCAAAGATTGCCTCTGCAATATGAAAGATGAAATCTCGTTCAGTCTGGGTCTCACAAGTCTAGTATTCTGGGGAGTTGCTGAAATTCCTCAAATAATAACCATTTTTCGAACTAAGAAAAGTCATGGAGTATCCCTCCTTTTTCTCCTCACTTGGGTCGCTGGGGATATCTGCAATTTGACTGGTTGCCTTCTTGAACCAGCTACTTTGCCAACACAGTATTACACAGCTCTGCTTTACACAATCACTACGATCGTATTACTACTGCTAATCATATATTACGACTACATAAGCAATTGGTACAAACTTCGTCAGAAGGTCAACCACAAAAGGGATGAAGAAGAAGAGAGAAAACAATTGAAGCCACCGAAACCAACCTACGAGTCAGGAATTCCAATACCAAATGGCACACTCAAAGCAGTACCTAGACAGGAGCACTATTATATGTCAGCAAGATCATTGGCTGGAAGTGGCACTCCACCCTGGGGAACTTACATGAGAGCTGCTAAAAGTGGTCCTTCAGCCATGGAATCCATACATGACTCTTCTTCCGAGGATGATGAAACTTATCCAGCTTCCTCAAAAAATCCTCCAACCAAAGCTAGGCCAATCCCACGTCCTGCAGTTGGAAGTTATGGTACATTTCTAGCAGCTGCTGTTAATTTGCCTCTCAAGGCTAATGCTTTGAGGGAAGGATACATAAGATTTGGTGGAAGAAAACTTTTGCAGGAATACGAGACACATAGTACATTTGGTCAAGGGTTGGGATGGCTCATGGCTGCTATCTATATAAGTGGTCGGATTCCTCAAATATGGTTGAACATTAAAAGAGGCAGTGTGGAGGGCTTAAGTCCTTTCATGTTCATCTTTGCATTGGTCGCTAATGTCACTTACGTGGGAAGTATTCTTGTGAGAACTACAGAATTCGAAAGCATCAAAGCTAATATGCCATGGTTATTGGATGCAGTATTATGCGTGGCATTGGACCTTTTCATAATATTGCAGTACATCTACTATAGATACTTTCGGAGGAAAGAAGGAAGAGGAGACTACTACGAAGGGGAAAGAGCTGCATCATCTTGA 1143 0.4208 MAASYCVEERKACVRWVEKYFKDCLCNMKDEISFSLGLTSLVFWGVAEIPQIITIFRTKKSHGVSLLFLLTWVAGDICNLTGCLLEPATLPTQYYTALLYTITTIVLLLLIIYYDYISNWYKLRQKVNHKRDEEEERKQLKPPKPTYESGIPIPNGTLKAVPRQEHYYMSARSLAGSGTPPWGTYMRAAKSGPSAMESIHDSSSEDDETYPASSKNPPTKARPIPRPAVGSYGTFLAAAVNLPLKANALREGYIRFGGRKLLQEYETHSTFGQGLGWLMAAIYISGRIPQIWLNIKRGSVEGLSPFMFIFALVANVTYVGSILVRTTEFESIKANMPWLLDAVLCVALDLFIILQYIYYRYFRRKEGRGDYYEGERAASS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00510 380 SMART ctns 46 77 IPR006603 -
Phco8g00510 380 SMART ctns 285 316 IPR006603 -
Phco8g00510 380 FunFam PQ loop repeat family protein 33 123 - -
Phco8g00510 380 FunFam Vacuolar membrane PQ loop repeat protein 271 368 - -
Phco8g00510 380 MobiDBLite consensus disorder prediction 194 226 - -
Phco8g00510 380 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 362 - -
Phco8g00510 380 Gene3D - 273 369 - -
Phco8g00510 380 Pfam PQ loop repeat 272 327 IPR006603 -
Phco8g00510 380 Pfam PQ loop repeat 32 88 IPR006603 -
Phco8g00510 380 Gene3D - 29 116 - -
Phco8g00510 380 MobiDBLite consensus disorder prediction 131 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00510 Phco-Chr8 5011210 5015055 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00510 8 5011210 5015055 Phco8g00510 8 5011210 5015055 ECH
Phco4g01031 4 8173360 8176729 Phco8g00510 8 5011210 5015055 PCT