Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00506 ATGACTGCACTTAATTTCAACGCATGGCTACACCCCAGCTTCACCAGATCCAGATCCCCAACTTTTCTATTTCATGGCCTCGCTAACTTTCCCATTTCCATTCCCATTCCCTCCCTCACAGTTACCAAACGCCCAAGAGATAAGCCTTATTCATCAACCACGTCTTTCACGCTCTCTGCACTCCTCACCAAAGAGGAGACACTTCAGACGGAAGAAAAGCCGGCGTTCAACTTCAAGTCCTACATGCTCCTCCAAGCCGACGCCGTCAACCAGGCGCTCGACCACGCCGTTCCGCTCCGCGAGCCGCTGCGGATCCACGAGGCCATGCGCTATTCCCTCCTCGCCGGCGGAAAGCGCGTGCGCCCCGTCCTCTGCGTCGCCGCCTGCGAGCTTGTCGGCGGCTCCGCCGCCACCGCGATGCCCGCTGCCTGCGCCGTCGAGATGATCCACACCATGTCCCTCATCCACGACGACCTCCCCTGCATGGACAACGACGACCTCCGCCGCGGTAAGCCTACCAACCACAAGGTCTTCGGAGAGGACGTGGCAGTCCTCGCCGGCGACGCGCTCCTCGCATTCGCCTTCGAGCACATCGCCGGCGCTACCGTTGGTGCCTCCCCGCCGCGCATCGTCCGCGCCCTCGGTGAGCTCGCCCGCGCCATCGGCGCTGAGGGACTCGTCGCCGGCCAGGTGGTCGACATCAAATCCGAGGGGCTTGACAACGTCGGCCTCGAACGCTTGGAGTTCATCCATCTCCACAAGACCGCAGCCCTGCTGGAGGGCGCGGTGGTCCTCGGCGCCATCCTGGGCGGTGGAACCGACGAGGAGATTGAGAAATTGAGGAAGTTCGCGCGGTATATAGGATTGCTGTTTCAGGTGGTTGATGACATTCTGGATGTTACGAAGTCTTCCCAGGAATTGGGGAAAACTGCGGGGAAGGATCTTGCCGCTGATAAGGTTACTTATCCCAAGCTTTTGGGGATTGAGAAGTCTAAGGAGTTTGCTGCCAAATTGAACAAAGATGCTCATGATCAGCTTTCTGGCTTTGATCCTGTCAAGGCTGCTCCTTTAGTTGCTTTATCCAATTACATTGCTCATAGGCAGAACTAG 1110 0.5829 MTALNFNAWLHPSFTRSRSPTFLFHGLANFPISIPIPSLTVTKRPRDKPYSSTTSFTLSALLTKEETLQTEEKPAFNFKSYMLLQADAVNQALDHAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGSAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDNVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAHDQLSGFDPVKAAPLVALSNYIAHRQN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00506 369 ProSitePatterns Polyprenyl synthases signature 2. 287 299 IPR033749 -
Phco8g00506 369 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 55 369 - -
Phco8g00506 369 SFLD Isoprenoid Synthase Type I 85 367 - -
Phco8g00506 369 SUPERFAMILY Terpenoid synthases 80 349 IPR008949 -
Phco8g00506 369 ProSitePatterns Polyprenyl synthases signature 1. 154 170 IPR033749 -
Phco8g00506 369 FunFam Geranylgeranyl diphosphate synthase 75 369 - -
Phco8g00506 369 CDD Trans_IPPS_HT 101 367 IPR000092 GO:0008299
Phco8g00506 369 SFLD Polyprenyl Transferase Like 85 367 - -
Phco8g00506 369 Pfam Polyprenyl synthetase 105 338 IPR000092 GO:0008299
Phco8g00506 369 Gene3D Farnesyl Diphosphate Synthase 70 369 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00506 Phco-Chr8 4948981 4950090 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00506 8 4948981 4950090 Phco8g00506 8 4948981 4950090 ECH
Phco8g00506 8 4948981 4950090 Phco4g01023 4 8119263 8120366 ECH
Phco4g01023 4 8119263 8120366 Phco8g00506 8 4948981 4950090 PCT