Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00500 ATGGCAGCTTCCGCTTCCAATGCTGTTCTTCTCGGAGACGTCTACTTCGACGAAGTCGCCGCCAAGCCCTCCGGCGTTCGCTTCCGGGACAGGATGCGCCGCACCGCTTTGCGAGCTACCGTCAATCTCACAAGATTGCAACCCTTGAACAGTCTCTTGAACTTCGGGTGCTCCACCTCCGATGCAACTTGGAGGAGTTGGAGTCCGAGCTCGCTCCTTGTTGGAACCAAGCACTCCTCCTTTCCTTGCTGCTCCGCCGAGACAACGCCTCATGTTCAACACCTTGCCTCCTCCACATTTTCATTCGACCAAACAAATTTTGGTGTCGAGAGGTTGAAGTTGTTTTCGGGGTCATGTTACCTACCACATCCGGATAAGGAGGACTATGGTGGAGAGGATGCACATTTCATTTGCGTAGATGAACAAACAATTGGTGTTGCAGATGGTGTTGGTGGCTGGGCAGATGTTGGTGTTAATGCTGGACTGTTTGCTCAAGAACTCATGTCCCATTCTGTTAGAGCAATTCAAGAGGGACCAAAAGGTCCTGTTGATCCCGCCAGTGTTTTAGAGAAGGCTCACTCATGTACAAAGGCCAAGGGTTCATCAACAGCTTGTATCATTGCTCTTACTGATACGGGACTGCATGCCATTAATTTGGGTGACAGTGGGTTCATTGTGATTAGAGATGGATGCACCATTTTCAGGTCCCCTGTTCAACAGCATGACTTCAATTTTACGTATCAACTGGAGAGTGGCAATGGATGTGATCTACCCAGCTCTGGTGAGGTATTTAAAATATCTGTTGCACCAGGAGATGTTGTCGTTGCTGGAACAGATGGATTGTTTGACAATCTGTACAACGATGAGGTTGCTGAAGTTGTTTTGAATGCAGTTAGAGCTGGACTAGAACCCAAAGTAACTGCTCAGAAGATAGCAGCACTGGCTCGTCAGAGGGCACTGGACAGGAATAGGCAGACACCATTTTCTACTGCCGCTCAAGAGGCTGGGTTCAATTATTATGGTGGGAAGCTTGATGACATAACAGTTGTTGTGTCATACATAACTGGCTCAACATGTTGA 1080 0.4824 MAASASNAVLLGDVYFDEVAAKPSGVRFRDRMRRTALRATVNLTRLQPLNSLLNFGCSTSDATWRSWSPSSLLVGTKHSSFPCCSAETTPHVQHLASSTFSFDQTNFGVERLKLFSGSCYLPHPDKEDYGGEDAHFICVDEQTIGVADGVGGWADVGVNAGLFAQELMSHSVRAIQEGPKGPVDPASVLEKAHSCTKAKGSSTACIIALTDTGLHAINLGDSGFIVIRDGCTIFRSPVQQHDFNFTYQLESGNGCDLPSSGEVFKISVAPGDVVVAGTDGLFDNLYNDEVAEVVLNAVRAGLEPKVTAQKIAALARQRALDRNRQTPFSTAAQEAGFNYYGGKLDDITVVVSYITGSTC 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00500 359 PANTHER PROTEIN PHOSPHATASE 2C 106 355 IPR039123 -
Phco8g00500 359 SMART PP2C_4 109 352 IPR001932 -
Phco8g00500 359 Gene3D - 257 358 IPR036457 -
Phco8g00500 359 SMART PP2C_SIG_2 128 354 IPR001932 -
Phco8g00500 359 FunFam 5-azacytidine resistance protein azr1 123 248 - -
Phco8g00500 359 Gene3D - 126 251 IPR036457 -
Phco8g00500 359 ProSiteProfiles PPM-type phosphatase domain profile. 118 354 IPR001932 -
Phco8g00500 359 Pfam Stage II sporulation protein E (SpoIIE) 143 352 IPR001932 -
Phco8g00500 359 SUPERFAMILY PP2C-like 119 352 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00500 Phco-Chr8 4766613 4775897 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00500 8 4766613 4775897 Phco8g00500 8 4766613 4775897 ECH
Phco8g00500 8 4766613 4775897 Phco4g01005 4 7955370 7958129 ECH
Phco4g01005 4 7955370 7958129 Phco8g00500 8 4766613 4775897 PCT