Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01005 ATGCCTGGTATTTTCTCAAGGCCGAATGCTACCATTTACTGTGGCATTCGGAAAGCATTAACTACGCAACAAGGAGTACCTGCAGCATTGTATAGAAGTTCAGGCTTGTCTCTTTGTTCTCTGTATTCAAATTTCTTTTTGCCCGGTTCAACTCATTGCTCTTCAAGCCACACGCTTAACGCAAAATCAATGGCTACCACCTCCCATTCCAATGCTGTGCTGGGAGATGTTTACGTTGATGGTTTAATCTCAGGTTGTGGTAGTGTGCTAGACTTCACAAAGCCTGCTGTTATGTACTTCAAAGACAAAACTCTTAAAGGCTGCCTAAGGGTTGGCGTGAATCTAGGGAGACCACAACCTTTATTTGGTCCTTTGAGTTTTGGTAGTTCTACTTTTGATTCTAATTGGAGGATTCGGGATTCGAGTTTGCTTCATGGATCATGGCTGAAGAATTTCTGTACCTCTTCTTCTGCCAGCCCATCAGCTGGGGCTGCACATGCTGTCTCTTTTGATGGCAGCCCTCCCGATGAACAGCTTTCAAATTCCTCTTTTTCACCTGATCTAACTACTGTTGGTGGCAAGACCTTGAAGATGTTGTCAGGATCTTGTTATCTACCACATCCAGATAAGGAGGAGACAGGAGGAGAGGATGCTCATTTTATTTGCGCAGATGAACAAGCAATTGGTGTTGCTGATGGTGTAGGTGGCTGGGCAGATGTTGGTGTTAATTCTGGACTGTTTTCCCGGGAACTTATATCCAATTCAGTGAGAGCAATTCAAGAGGAGCCCCAAGGTTCTTTTAATCCAACAAGGGTGTTAGAGAAGGCTCATTCAAATACAAAGGCCAAGGGTTCATCAACAGCTTGTATTGTTGCCCTGACTGATAAGGGATTACATGGTATTAATTTGGGCGACAGTGGATTCATTGTGGTTAGAGATGGATGCACCATCTTCCAGTCCGCTGTTCAACAACATGACTTCAATTTCACTTATCAGTTGGAGAGTGGCAATGGAGCGGATCTACCCAGCTCTGGTGAGGTTTTTACCATACCTGTTACTTCAGGAGATGTAGTCATTGCTGGGACAGATGGCTTATTTGACAATTTATACAATAGTGAGATCACTGCAGTTGTTGTACATGCAATTAGGGCTGGACTAGAGCCCCAAGTAACTGCTCAGAAGATAGCAGCACTGGCTCGTCAGCGAGCACTGGACCAGAGCAGACCGACACCATTTTCTACTGCTGCTCAGGAGGCTGGATTCCGTTATTATGGTGGCAAACTTGATGACATAACTGTTGTTGTCTCATACATTTCTGGGTCACTTAGCGAGTGA 1335 0.4472 MPGIFSRPNATIYCGIRKALTTQQGVPAALYRSSGLSLCSLYSNFFLPGSTHCSSSHTLNAKSMATTSHSNAVLGDVYVDGLISGCGSVLDFTKPAVMYFKDKTLKGCLRVGVNLGRPQPLFGPLSFGSSTFDSNWRIRDSSLLHGSWLKNFCTSSSASPSAGAAHAVSFDGSPPDEQLSNSSFSPDLTTVGGKTLKMLSGSCYLPHPDKEETGGEDAHFICADEQAIGVADGVGGWADVGVNSGLFSRELISNSVRAIQEEPQGSFNPTRVLEKAHSNTKAKGSSTACIVALTDKGLHGINLGDSGFIVVRDGCTIFQSAVQQHDFNFTYQLESGNGADLPSSGEVFTIPVTSGDVVIAGTDGLFDNLYNSEITAVVVHAIRAGLEPQVTAQKIAALARQRALDQSRPTPFSTAAQEAGFRYYGGKLDDITVVVSYISGSLSE 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01005 444 FunFam 5-azacytidine resistance protein azr1 207 332 - -
Phco4g01005 444 SMART PP2C_SIG_2 211 438 IPR001932 -
Phco4g01005 444 SUPERFAMILY PP2C-like 202 436 IPR036457 -
Phco4g01005 444 Gene3D - 339 443 IPR036457 -
Phco4g01005 444 Pfam Stage II sporulation protein E (SpoIIE) 226 436 IPR001932 -
Phco4g01005 444 Gene3D - 208 334 IPR036457 -
Phco4g01005 444 ProSiteProfiles PPM-type phosphatase domain profile. 199 438 IPR001932 -
Phco4g01005 444 PANTHER PROTEIN PHOSPHATASE 2C 177 438 IPR039123 -
Phco4g01005 444 MobiDBLite consensus disorder prediction 164 187 - -
Phco4g01005 444 SMART PP2C_4 189 436 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01005 Phco-Chr4 7955370 7958129 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01005 4 7955370 7958129 Phco4g01005 4 7955370 7958129 ECH
Phco8g00500 8 4766613 4775897 Phco4g01005 4 7955370 7958129 ECH
Phco4g01005 4 7955370 7958129 Phco8g00500 8 4766613 4775897 PCT