Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00457 ATGTCTGGACCCCTAACTCCAAAGACATCTCTTGAAAAGAGTGATCGTGTTGGCTCATTGAAGAAGAAGTTGAGGAATTCCTTGACAAGGAGTAGGAGAAGAAGCAGCAGCAAGGTCATGTCGATTGAAATCGAGGATATCCGCGATGCTGAAGAATCCAAAGCCGTTGATGAGTTCCGTCAGGCTCTTATCTTGGACGAGCTACTCCCAGAGAAGCACGATGATTATCACATGTTACTCAGGTTCCTTAAGGCAAGGAAATTTGACCTTGAGAAATCTAAGCAAATGTGGTGTGACATGCTTCAGTGGAGGAAGGAATTTGGTGCTGATACCATCACCGAGGATTTTGAATTCAAGGAACTGGATGAAGTCTTGCAATATTATCCTCATGGGCATCATGGAGTCGATAAAGATGGTCGACCAGTGTACATCGAGAGATTGGGCCAAGTCGACGCCACCAAGTTGATGCAGGTCACAACCATGGACCGCTATGTCAAGTACCATGTGAAGGAGTTCGAGAGGACATTTGATGTGAAATTCGCAGCTTGCTCCCTTGCTGCAAAGAAACACATCGATCAAAGCACAACCATCCTTGATGTGCAAGGAGTGGGCCTTAAGAACTTCAACAAGCATGCCAGGGAGCTCATCACAGCCCTTCAAAAGATTGACGGAGACAACTATCCTGAAACCTTGAACCGCATGTTCATCATCAATGCAGGTTCTGGATTCAGAATGTTGTGGAGCACTGTTAAATCCTTCCTTGACCCAAAGACCACATCAAAAATCCATGTTCTTGGCAACAAGTACCAAAGCAAATTGCTTGAAATGATTGATGAGAGTGAGTTGCCAGAGTTTTTGGGAGGCAAATGTACTTGTGCCGATCAAGGAGGCTGCATGCGCTCTGATAAGGGCCCCTGGAAGGATGAGGAAATAATGAAGATGGTTCAAAATGGTGAGCACAAATGTTCAAGGAAATGTGAGGCTCCAGTCATGGAAGAGAAGACAACTTCTGAGGAACACGAGACTATTATGGCCGAGGCAAATCTCACCAAACAATTGTCTGTTGTCCTTGGTGAGGCCGTTGCTGCGAAGAGTTACAACTACGAGGACTTTGTCCCCTCAGCTGAAAAAACTGCTTGGAAAAAGGTGGAAGACAATGACAAATATGCAGTATCCAAAGATGGAGCAGATGCATACGCCATGGATTCTTTCAAGATTCACGAGAAAGTGAATTCACAAATCTTCACTGGCGTGATGGCCTTTGTGATGGGCATAGTGACCATGGTGAGGATGACCAGGAACATGCCCAAGAAGCTCACAGACGCCAACTTCTACTCCAACTTCGGTGGTGAATACAAGGGCCAGGGCAATAACGACCAAATGACCATTCCTGCCATCTCTCCTCAAGAGTTCATGACCGTGATGAAGCGCATGGCTGAGTTGGAAGAGAAAATGAGCAACATGAACAACTTCACCGTCTGCATGCCACCTGAGAAGGAGGAAATGCTCAATGCTGCTATCACCCGAGCAGATACTTTGGAGCAAGAACTCATGGCAACCAAAAAGGCTTTGGAGGAATCCCTTACTAAGCAAGAGGAGCTTTCGGCTTACGTTGAAAAGAAGAAGAAGAAGAAGAAGTTGCTTGGTGAGGGATGGAAAGGAGACCATTACAGGTGTTGGCAGTTTTTTTGTGGTTCAACAATGATGGAGACACTCATTGGTGATGATGTCATGGACAACACTTGA 1746 0.4576 MSGPLTPKTSLEKSDRVGSLKKKLRNSLTRSRRRSSSKVMSIEIEDIRDAEESKAVDEFRQALILDELLPEKHDDYHMLLRFLKARKFDLEKSKQMWCDMLQWRKEFGADTITEDFEFKELDEVLQYYPHGHHGVDKDGRPVYIERLGQVDATKLMQVTTMDRYVKYHVKEFERTFDVKFAACSLAAKKHIDQSTTILDVQGVGLKNFNKHARELITALQKIDGDNYPETLNRMFIINAGSGFRMLWSTVKSFLDPKTTSKIHVLGNKYQSKLLEMIDESELPEFLGGKCTCADQGGCMRSDKGPWKDEEIMKMVQNGEHKCSRKCEAPVMEEKTTSEEHETIMAEANLTKQLSVVLGEAVAAKSYNYEDFVPSAEKTAWKKVEDNDKYAVSKDGADAYAMDSFKIHEKVNSQIFTGVMAFVMGIVTMVRMTRNMPKKLTDANFYSNFGGEYKGQGNNDQMTIPAISPQEFMTVMKRMAELEEKMSNMNNFTVCMPPEKEEMLNAAITRADTLEQELMATKKALEESLTKQEELSAYVEKKKKKKKLLGEGWKGDHYRCWQFFCGSTMMETLIGDDVMDNT 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00457 581 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 12 542 - -
Phco8g00457 581 Pfam CRAL/TRIO domain 126 288 IPR001251 -
Phco8g00457 581 SUPERFAMILY CRAL/TRIO domain 120 316 IPR036865 -
Phco8g00457 581 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 120 294 IPR001251 -
Phco8g00457 581 Gene3D - 108 320 IPR036865 -
Phco8g00457 581 Coils Coil 503 534 - -
Phco8g00457 581 CDD SEC14 121 289 IPR001251 -
Phco8g00457 581 FunFam SEC14 cytosolic factor 108 320 - -
Phco8g00457 581 Pfam CRAL/TRIO, N-terminal domain 71 98 IPR011074 -
Phco8g00457 581 SUPERFAMILY CRAL/TRIO N-terminal domain 49 116 IPR036273 -
Phco8g00457 581 SMART CRAL_TRIO_N_2 75 100 IPR011074 -
Phco8g00457 581 SMART sec14_4 120 291 IPR001251 -
Phco8g00457 581 MobiDBLite consensus disorder prediction 1 35 - -
Phco8g00457 581 Gene3D - 23 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00457 Phco-Chr8 4279035 4284097 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00457 8 4279035 4284097 Phco8g00457 8 4279035 4284097 ECH
Phco9g00486 9 3560676 3564219 Phco8g00457 8 4279035 4284097 ECH