Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00398 ATGTCAGACATAGTGAAGCAACTGTTGGCAAAGCCGATCCAATTGGCTGACCAAGTGACCAAGTCAGCGGAAGAGGCCAGTTCCTCTTTCAAGCAAGAGTGCTTAGAACTCAAATCAAAGACCGAAAAACTCGCGGGGCTTCTTCGACAAGCAGCACGTGCCAGCTCCGACCTGTACGAGCGTCCCACGCGGCGTATAATCGCCGACACCGAACTCGTCCTCGACAAGGCCCTATCTTTGGTCCTGAAATGCCGCGCCAACGGCCTCATGAAGCGCGTGTTCAGTATCATTCCGACGGCGGCGTTTCGCAAGATGTCGTCCCAGCTCGAGAATTCCATCGGCGACGTGTCGTGGCTCCTCCGGGTTTCGGCTCCGGCGGAGGATCGCGGTGACGAGTATCTCGGCCTCCCTCCGATCGCCGCAAACGAGCCCATCTTGGGCCTCATTTGGGAGCAGGTGGCGACCCTTCACACAGGCTCTCTCGACGACCGATCTGACGCAGCCGCCTCGCTCGTGTCGCTGGCACGTGACAACGACCGGTATGGGAAGTTGATCATCGAGGAAGGTGGGGTTGGACCCTTGTTGAAGCTGATCAAGGAGGGTAAAAAAGAGGGTCAAGAGAACGCCGCCAGGGCTATTGGGCTTCTGGGTCGTGACCCTGAGAGCGTGGAGCTTATGATCCTTGCCGGGGTGTGCTCTGTCTTCGCCAAAGTCCTGAAAGAAGGTCCCATGAAAGTTCAAGCTGTGGTTGCCTGGGCCGTGTCTGAGTTGGCAGCTAAGTACCCAAAATGTCAAGATCTTTTCGCTCAGCATAATATTGTTCGCTTGCTTGTAAGTCATCTTGCTTTTGAAACCGTTCAGGAGCATAGTAAATACGCAATTGTTAGCAACAAACCCACATCAATCCATGCTGTTGTGATGGCTAGTAATAATTCTAATGGCAATAGTTTGAAAAAGGAGAGTGAATATGAGGAAAAGCTTATGCAAAGTCGCATGCAGCATCCCTTAGGTGATAAGTCCACAAATCAGATGCTTAAAGTGGTCACAAGTACCATGGCAATGCATGCTGCCAACAAGCAGCAGCAACAGTTCAATCAAGACAATGAAGGGACTCAGAACTCACAGGGTGCTCCGCCAAAGGCCAATGGGAATAGTAATGGCAAGCAGAGCCATCAGTCCCACCAGCAAAACTATACCTATTCTGGAATTAACATGAAGGGAAGGGAACTGGAGGACCCTGAGAATAAGGCTTACATGAAAGCAATGGCAGCAAGAGCCCTCCGGCAGCTCGCCAAGGGCAACGTAGCCATTTGTCGGAGCATCACTGAATCGAGGGCTCTGTTGTGCTTTGCCATTCTCCTTGAGAAAGGGTCTGAAGATGTGAAGTACAATTCTGCCTTGGCAGTGAAGGAGATAACGGCAGTGGCAGAAAAAGACGCAGAATTGAGAAGATCAGCTTTCAAACCCAACTCTCCCGCTTGCAAGGCAGTTGTTGATCAAGTGCTTAAGATCATTGAGAAGGAAGATACAAAACTCCTGATTCCTTGCATAAAGGCTATAGGGAATTTGGCAAGGACATTCCGGGCAACGGAGACAAGGATAATTGGTCCCTTGGTCCGGCTTCTCGATGAAAGAGGGGCAGAGGTGTCAAGGGAAGCAGCAATCTCTCTCACAAAATTTGCCTGCACGGAAAACTACCTCTGCCTTGATCACTCCAAGGCAATTATAAGTGCTGGTGGTGCAAAGCACTTGGTCCAGCTTGTGTATTTTGGAGAACAGACAGTTCAGATTTCAGCACTAGTTCTCCTCTCCTACATTGCATTGCATGTGCCAGACAGTGAGGAACTTGCTAAGGCCGAGGTTCTTGGAGTGCTTGAATGGGCTTCCAAGCAACCTAACGTGACGCAGGATGAAACCATCGAGGCTTTGTTGCAGGAATCCAAAGGTAGGCTGGAGCTTTATCAGTCTAGAGGTTCAAGAGGATTCCAAAAATTACATCAATAG 2004 0.504 MSDIVKQLLAKPIQLADQVTKSAEEASSSFKQECLELKSKTEKLAGLLRQAARASSDLYERPTRRIIADTELVLDKALSLVLKCRANGLMKRVFSIIPTAAFRKMSSQLENSIGDVSWLLRVSAPAEDRGDEYLGLPPIAANEPILGLIWEQVATLHTGSLDDRSDAAASLVSLARDNDRYGKLIIEEGGVGPLLKLIKEGKKEGQENAARAIGLLGRDPESVELMILAGVCSVFAKVLKEGPMKVQAVVAWAVSELAAKYPKCQDLFAQHNIVRLLVSHLAFETVQEHSKYAIVSNKPTSIHAVVMASNNSNGNSLKKESEYEEKLMQSRMQHPLGDKSTNQMLKVVTSTMAMHAANKQQQQFNQDNEGTQNSQGAPPKANGNSNGKQSHQSHQQNYTYSGINMKGRELEDPENKAYMKAMAARALRQLAKGNVAICRSITESRALLCFAILLEKGSEDVKYNSALAVKEITAVAEKDAELRRSAFKPNSPACKAVVDQVLKIIEKEDTKLLIPCIKAIGNLARTFRATETRIIGPLVRLLDERGAEVSREAAISLTKFACTENYLCLDHSKAIISAGGAKHLVQLVYFGEQTVQISALVLLSYIALHVPDSEELAKAEVLGVLEWASKQPNVTQDETIEALLQESKGRLELYQSRGSRGFQKLHQ 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00398 667 Gene3D - 3 122 IPR036537 GO:0007166
Phco8g00398 667 MobiDBLite consensus disorder prediction 311 337 - -
Phco8g00398 667 FunFam Armadillo repeat only 2 151 321 - -
Phco8g00398 667 FunFam Armadillo repeat only 4 2 122 - -
Phco8g00398 667 Pfam Armadillo/beta-catenin-like repeat 184 215 IPR000225 GO:0005515
Phco8g00398 667 MobiDBLite consensus disorder prediction 361 394 - -
Phco8g00398 667 Gene3D - 405 652 IPR011989 -
Phco8g00398 667 SMART arm_5 568 608 IPR000225 GO:0005515
Phco8g00398 667 SMART arm_5 219 259 IPR000225 GO:0005515
Phco8g00398 667 SMART arm_5 177 218 IPR000225 GO:0005515
Phco8g00398 667 SMART arm_5 490 525 IPR000225 GO:0005515
Phco8g00398 667 SMART arm_5 434 474 IPR000225 GO:0005515
Phco8g00398 667 MobiDBLite consensus disorder prediction 318 332 - -
Phco8g00398 667 PANTHER ARMADILLO REPEAT ONLY 4 1 659 - -
Phco8g00398 667 SUPERFAMILY ARM repeat 155 635 IPR016024 -
Phco8g00398 667 Gene3D - 149 329 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00398 Phco-Chr8 3617111 3619114 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00398 8 3617111 3619114 Phco4g00862 4 6701423 6703408 PCT