Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00397 ATGACAGACACAGTGAAGCAACTGTTGGCAAAGCCGATCCAATTGGCCGACCAAGTGACCAAGGCAGCGGAAGAAGCCAGTTCCTCTTTCAAGCAAGAGTGCTTAGAACTCAAATCAAAGACCAAAAAACTCGCGGGGCATCTTCGACAAGCAGCACGTGCCAGCTCCGACCTGTACGAGAGTCCCACGCGGCGTATAATCGCCGACACCGAACTCGTCCTCAACAAGGCCCTATCTTTGGTCCTGAAATGCAGCGCCAACGGCCTCATGAAGCGCGTGTTCAGTATCATTTCAACGGCGGCGTTTCGCAGGATGTCGTCCCAGCTCGAGAATTCCATCGGCGACGTGTCGTGGCTCCTCCGGGTTTCGGCTCCGGCGGAGGATCGCGGTGACGAGTATCTCGGCCTCCCTCCGATCGCCGCAAACGAGCCCATCTTGGGCCTCATTTGGGAGCAGGTGGCGACCCTTCACACAGGCTCTCTCGACGACCGATCTGACGCAGCCGCCTCGCTCGTGTCGCTGGCACGTGACAACGACCGGTATGGGAAGTTGATCATCGAGGAAGGTGGGGTTGGACCCTTGTTGAAGCTGATCAAGGAGGGTAAAAAAGAGGGTCAAGAGAACGCCGCCGGGGCTATTGGGCTTCTGGGTCGTGACCCTGAGAGCGTGGAGCTTATGATCCTTGCCGGGGTGTGCTCTGTCTTCGCCGAAGTCCTGAAAGAAGGTCCCATGAAAGTTCAAGCTGTGGTTGCCTGGGCCGTGTCTGAGTTGGCAGCTAAGTACCCAAAATGTCAAGATCTTTTCGCTCAGCATTATATCGTTCGCTTGCTTGTAAGTCATCTTGCTTTTGAAACCGTTCAGGAACATAGTAAATACGCAATTGTTAGCAACAAACCCACATCAATCCATGCTGTTGTGATGGCTAGTAATAATTCTAATGGCAATAGTTTGAAAAAGGAGAGTGAATATGAGGAAAAGCTTATGCAAAGTCGCATGCAACATCCCTTAGGTGATATGTCCACAAATCGGATGCTTAAAGTGGTCACAAGTACCATGGCAATGCATGCTGCCAACAAGCAGCAGCAACAGTTCAATCAAGACAATGAAGGGACTCAGAACTCACAGGGTGCTCCGCCAAAGCCCAATGGGAATAGTAATGGCAAGCAAAGCCATCAGTCCCACCAGCAAAGCTATACCTACTCTGGAATTAACATGAAGGGAAGGGAACTGGAGGACCCTGAGAATAAGGCTTACATGAAAGCAATGGCAGCAAGAGCCCTCGGGCAGCTCGCCAAGGGCAACGTAGCCATTTGTCGGAGCATCACAGAATCGAGGGCTCTGTTGTGCTTTGCCATTCTCCTTGAGAAAGGGTCTGAAGATGTGAAGTACAATTCTGCCTTGGCAGTGAAGGAGATAACGGCAGTGGCAGAAAAAGACGCAGAATTGAGAAGATCAGCTTTCAAACCCAACTCTCCCGCTTGCAAGGCAGTTGTTGATCAAGTGCTTAAGATCATTGAGAAGGAAGATACAAAACTCCTGATTCTTTGCATAAAGGTTATAGGGAATTTGGCAAGGACATTCGGGGCAACGGAGACAAGGATAATAGGTCCCTTGGTCCGGCTTCTTGATGAAGGAAGGCCAGAGGTGTCAAGGGAAGCAGCAATCTCTCTCACAAAATTTGCCTGCACGGAAAACTACTTCTGCTTTGATCACTCCAAGGCAATTATAAGTGCTGGTGGTGCAAAGCACTTGGTCCAGCTTGTGTATTTTGGAGAACAGACAGTTCAGATTTCAGCACTAGTTCTGCTCTCCTACATTGCATTGCATGTGCCAGACAGTGAGGAACTTGCTAGGGCAGAGGTTCTTGGAGTGCTTGAATGGGCCTCCAAGCAACCTAACGTGCCGGATGAAACCATCCAGGCTTTGTTGCAGGAATCCAAAGGTAGGCTGAAGCCTTATCAGTCTAGAGGCTTCACTCCCTTTGCCTAA 1989 0.5053 MTDTVKQLLAKPIQLADQVTKAAEEASSSFKQECLELKSKTKKLAGHLRQAARASSDLYESPTRRIIADTELVLNKALSLVLKCSANGLMKRVFSIISTAAFRRMSSQLENSIGDVSWLLRVSAPAEDRGDEYLGLPPIAANEPILGLIWEQVATLHTGSLDDRSDAAASLVSLARDNDRYGKLIIEEGGVGPLLKLIKEGKKEGQENAAGAIGLLGRDPESVELMILAGVCSVFAEVLKEGPMKVQAVVAWAVSELAAKYPKCQDLFAQHYIVRLLVSHLAFETVQEHSKYAIVSNKPTSIHAVVMASNNSNGNSLKKESEYEEKLMQSRMQHPLGDMSTNRMLKVVTSTMAMHAANKQQQQFNQDNEGTQNSQGAPPKPNGNSNGKQSHQSHQQSYTYSGINMKGRELEDPENKAYMKAMAARALGQLAKGNVAICRSITESRALLCFAILLEKGSEDVKYNSALAVKEITAVAEKDAELRRSAFKPNSPACKAVVDQVLKIIEKEDTKLLILCIKVIGNLARTFGATETRIIGPLVRLLDEGRPEVSREAAISLTKFACTENYFCFDHSKAIISAGGAKHLVQLVYFGEQTVQISALVLLSYIALHVPDSEELARAEVLGVLEWASKQPNVPDETIQALLQESKGRLKPYQSRGFTPFA 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00397 662 PANTHER ARMADILLO REPEAT ONLY 4 1 656 - -
Phco8g00397 662 MobiDBLite consensus disorder prediction 361 396 - -
Phco8g00397 662 Gene3D - 3 122 IPR036537 GO:0007166
Phco8g00397 662 FunFam Armadillo repeat only 2 151 321 - -
Phco8g00397 662 Pfam Armadillo/beta-catenin-like repeat 184 215 IPR000225 GO:0005515
Phco8g00397 662 SMART arm_5 177 218 IPR000225 GO:0005515
Phco8g00397 662 SMART arm_5 490 525 IPR000225 GO:0005515
Phco8g00397 662 SMART arm_5 434 474 IPR000225 GO:0005515
Phco8g00397 662 SMART arm_5 219 259 IPR000225 GO:0005515
Phco8g00397 662 SMART arm_5 568 608 IPR000225 GO:0005515
Phco8g00397 662 Gene3D - 405 648 IPR011989 -
Phco8g00397 662 Gene3D - 149 328 IPR011989 -
Phco8g00397 662 SUPERFAMILY ARM repeat 155 635 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00397 Phco-Chr8 3609159 3612541 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00397 8 3609159 3612541 Phco8g00397 8 3609159 3612541 ECH
Phco4g00862 4 6701423 6703408 Phco8g00397 8 3609159 3612541 PCT