Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00327 ATGATATCTAGCGCCAAATGGAGGCGTCGTGCGCGTACAACTGCAAAACCACAGACCTCTGAGCTGTGTTTAGTGAAGGAATCACTTGTACTGTACGATGTTTATGGTTCTGATAAAACAAGATGGGACAATCTTATTTTGTTTACTTTGTTGATTTACGGGGTCCTTAGAAGACCAAATGACATGGGAGGCCTATTGCACATGTTCGAGTTCAATCAGGGTAGGATGGCCAAGAAAATTCATGCCCATAAGAACAATAACGATGATCTGGAAACATCTGGAAATGACATGCAGCTGCAAGTAGAAACCTCTCAGGTCTACTGTGCAGAAGGAGAATTACCATACTCCTTTCAAGTAGAAGATGTCTGGTCAAAGAAAGTCAGTTACTTAAGTGTGGATTCAGTGAAAAAACAGAACAAAGAGGATTTTTCCAAACAATCGGGTGCCAGAAATAGTGCCCCTAGCCTTGTGGCAAGGTTGATGGGGATGGACACCATGCCATTACCATTAGACACTAAATCCGTAGTTCCATTGGATGAGAGCACACATGAAAATATGGAGAGGAAGTTTTCAAAGAAGAAAATGAATAAAGGTTGGGTTGGTAGGGGTTCTTCAAACTTGAATTCTTCTAGCCATATGGAATTTGATTCATTTTATCAACACATTGATGATGACGATGATGATGAAGGGGTACATAGTTTTGGAGAGCCGAGGCCAAGGGAACATCCTCAAGAAGAGGAACTCCAAAAATTCAAGAAAGAATTTGAAGCGTATCAAGCAGCAAGGTTTGAGGAGTGGCCGAAGGCTGTTGACATCGGAAGTGGTTCTATGATAATGCTTTCTCAAGAGAACCTGAGCAAGGAGAACATGCAACATATTGCGAGTTCAAAGACAGATAGCAACTCATTTAAGACAAAGCTACCTAATGGGGACGTTATGGAGTCAATCTTATCTAAGAAAAAAGAATCCTTTCCATCAAGAAGTAAAACAAAAAGTAGGGACTTTGAGGAGTCTTTAATGATGAAATCCAGAAGCAGATTATTAGATATATGCGCTTCTCCCACTCAGATAGTTATCTTGAAGCCTGGTTCTGAAAGAATTTGCAATTGCAACCATGAAGAGAATTGCATCAGTTTATCAGGCACTTTACATGGGGGAAAAGGTATAGAAGATTTTCTTGAGGAAGTGAGAGAGCGCTTGAAGTGTGAACTCCAAGGGATTAGAGGTAGTGGAATTGAGTCACCTTTCAATGATAAACTATCTGATGCCAAAGAGGTCAGAGAAAGAGCGTCCAGAGATGCTGAACCTAATTTACTCCGCTCAGAATCAACAAGATCATACAAAAGTAAAATGCAGCTCAATGGACCGAGTTCCCCAGAATTTTTCAACATAGATACTAGGAGATTCTTGTCAGAGAGGCTAAGAAATACTGTAAAAAATGAATTGAATTTGGACATTCCTGAAGTGGCTTGTTATTTAGACAATGGCAAAGTTAGACTAAAGCAAGATACTATAAAGGGTGCAAATGACAAGAGCCAGTGGGGAGTTCTAAAAGAGAAAAAAGAATTACAAACATGTTCCTATAGACATAAATTAGATGACAATGTATTGTTCCACAAGGAGTTGTCTCCTAGGAACCTCGAAAGATCCTTGTCTGCTCCTGCATCAGGAACATCGTTTGGAAGGCTTCTTCTGGAGGACCGCCACATTTTAACGGGTGCCCTTATTCAGAGGAAGCTTGAAACTGTTGAAGCAAGGCCTGTGGGTGTTAAGAAACAGAAGAAAGATGGATTTAATATTAAAGAAAAACTTTCCAATTTCAAATATACTCTTGGTCTAAGAGGGAAGCTGTTTGGCAGAAGGGTTCATTCAAAAGTAGAATCACATGGCAGTGAAAATGGTTCAATTTTGAGAGATGTCAGGAGTGGACCAACTATTCTCTTGAAATGTGGTGACAGACATGAGAACTCCACCGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCTGTGCTGACGAAGAACATTGGAGACAGATTGGGTATTCAAGTCTAACATCAACTCCAGATGCATCTTCATTGGATGATATTTTTGTTCCCAAGGTTTTTAGAGATATCAGCTCTGGTTTGAATGAGCTAAAGAGGCAACTCGGTCAACTTGATTCTGACGGCTTTGATGATTTCACTACGAAGCAGGAGCCAATTGCGTCTGAATTAGTTCAATTGGATGATCCAGCAGAATCTTATGTAAGAGATCTGCTTGTTGCCTCTGGTATGTACTTTGGTTCATGGGATAAATATATTGGCAACTCAGTTTTTGAAGAAGTGGAAGAATCTCATAGGAAATTGGTGAAGGAGGATGAAAGATCCACAAAAGATGATAACAAGAATAAGGTAGAGCACAAGGTTTTGCTTGATTTGTTAAATGAGGCACTTTCCATTGTTCTTGGACCACCTTTGACATTGTCTAGATTCAGAAGGAAACTAAGCAATTCCTCCTTGCAGCCTCCACCATGTGGAAAGGAACTACTAAAGTTAGTATGGGACATTGTTCGTGTTTCTTTACATCCAACGTCTAACACGTCTCTTTATTCACTTGATAGTTTTGTGGCACAAGATCTAGGATCTAATTCCTGGTCTGGGCTAACAAATGAGGAGATTGATACATTGGAAAGAGAGACGGCATGTACAATCGCTGATGATTTGGTTGCAGAATTCACAAAGGATATGCTCTCGTAG 2736 0.4035 MISSAKWRRRARTTAKPQTSELCLVKESLVLYDVYGSDKTRWDNLILFTLLIYGVLRRPNDMGGLLHMFEFNQGRMAKKIHAHKNNNDDLETSGNDMQLQVETSQVYCAEGELPYSFQVEDVWSKKVSYLSVDSVKKQNKEDFSKQSGARNSAPSLVARLMGMDTMPLPLDTKSVVPLDESTHENMERKFSKKKMNKGWVGRGSSNLNSSSHMEFDSFYQHIDDDDDDEGVHSFGEPRPREHPQEEELQKFKKEFEAYQAARFEEWPKAVDIGSGSMIMLSQENLSKENMQHIASSKTDSNSFKTKLPNGDVMESILSKKKESFPSRSKTKSRDFEESLMMKSRSRLLDICASPTQIVILKPGSERICNCNHEENCISLSGTLHGGKGIEDFLEEVRERLKCELQGIRGSGIESPFNDKLSDAKEVRERASRDAEPNLLRSESTRSYKSKMQLNGPSSPEFFNIDTRRFLSERLRNTVKNELNLDIPEVACYLDNGKVRLKQDTIKGANDKSQWGVLKEKKELQTCSYRHKLDDNVLFHKELSPRNLERSLSAPASGTSFGRLLLEDRHILTGALIQRKLETVEARPVGVKKQKKDGFNIKEKLSNFKYTLGLRGKLFGRRVHSKVESHGSENGSILRDVRSGPTILLKCGDRHENSTEVPPSPASVCSCADEEHWRQIGYSSLTSTPDASSLDDIFVPKVFRDISSGLNELKRQLGQLDSDGFDDFTTKQEPIASELVQLDDPAESYVRDLLVASGMYFGSWDKYIGNSVFEEVEESHRKLVKEDERSTKDDNKNKVEHKVLLDLLNEALSIVLGPPLTLSRFRRKLSNSSLQPPPCGKELLKLVWDIVRVSLHPTSNTSLYSLDSFVAQDLGSNSWSGLTNEEIDTLERETACTIADDLVAEFTKDMLS 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00327 911 Pfam DUF761-associated sequence motif 153 167 IPR032795 -
Phco8g00327 911 Pfam Domain of unknown function (DUF4378) 747 904 IPR025486 -
Phco8g00327 911 MobiDBLite consensus disorder prediction 226 247 - -
Phco8g00327 911 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 62 910 - -
Phco8g00327 911 MobiDBLite consensus disorder prediction 416 438 - -
Phco8g00327 911 MobiDBLite consensus disorder prediction 418 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00327 Phco-Chr8 3029881 3035722 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00327 8 3029881 3035722 Phco8g00327 8 3029881 3035722 ECH
Phco4g00761 4 5867000 5871376 Phco8g00327 8 3029881 3035722 PCT