Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00761 ATGGGAGGCTTATTACACTTTTTCGAATTCAATCAGGGGAGGATGGCCAAGAAAGTCCTTACTCGGAAGAGACATCATGGTGGCCTGGAAGCTCCTCGAAATAGTCTAGATCTGCAAGTACAAACACCTCAGAACTTCTGCCCACAACGAGAATTATCATGCAATTATCAAGTAGAAGAAGAGGGCAGGCCGGAGAATAATCGTTATTCAAATGTGGGTTCAATGAAAAAACTGATCAATGAGGAGCTATCCAAACAATCAAGCACCAGGCAAAATGCGCCCAGCCTTGTTGCAAGGTTGATGGGGATAGATACGATGCCATTAGACACTAAATATGTTGTCCCATCAGATAAAAGAATAAGTGAAAACGTGGGGAAAAAGTCTTCAGAGAAAGGAGTGAGTCGAAGGGGTTCATCAGTTAGTTGGGGTTCTTCCAACTTTAATTCTTCGAGCCAGATGGATTTTGAGTCATTATACGAAGACATGGATGTTGTTGATGATGATGATGGATGGAACAAGAGCTTTGGAGAACCAAGGCGGCGGGATCATCCTCAGGATGAGGAACTACAGAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCTCGAGTGTTCGAAGGTTGCTGAAATTGGTGGTGTTCCTAGACGATTGTTTGTTCAACAAAACCTGAACAAGGAAAAGGTGGTTCATAATGAGTTACTTTCACAAAGAGCAGCAGCAGGGAAACTTGCAGATCTTGACAACCATTCATTCAAAACACCACCACCTGAAATTTATGGTTCAGAATATCGTGGTGACACGATGGAGTTAGTCCCAGCTACGCAAAGGAAAACCTTTCCTCCCAGGAGCAGAACACTAAGTAGAGACTTTGAGGAGTCCTTATTGATGAAATCTTGCAACAGATTAGACACGTCTGCTTCTCCCACTAGGATAGTTATCTTGAAGCCTGGTCCTGATAGCATTTGCAACCATGAAGAGAATTGGACCATTTCGACAGGAACTATACAAGGGAGAAATAGTATAGAAGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGGAAAATTGTCAAAAAGGTTTCTGTGGTTCGAGGGAGTGGAATTGAAACACCTTACAATGAAAAACCATCTGATCCTAAACTAATAGCCCGACATATAGTAAAGCAAGTCAGAGAAAGTACGACTAGAGATGCTGACACAAATTTACTCCACTCAGAATCAACAGGGTCGTTCAAAAGTGAAATGCAATTCAATGGACCAACTTCCCCAGAAATAATCAGCAGAGATACCCGGAAGTTCTTGTCAGATAGGCTAAGAAATGTTGTGAGAAGTCAAGCACATGCTGACTTTCCCGAGGGAAAATCAAGGTCACTTGCATTAGACAGCCATAAAGCTGGACTAAAGCAAGTGGGGGATATTATGAAGTACGCAAGTAATTGGGAAATTTCCAAAGAGGAGGCAGAAATGCAAACAGGTTCTTTCAGACATGAACTGGATGAAAATATATTTCTGCACAAGGATTTGTCCCCAAGGAATCTTGTAAGATCCTTGTCTGCTCCTGTATCACGATCAGGAACATCATTTGGGAAGCTTCTTCTGGAGGACCGCCACATTTTGACTGGTGCTCAGATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCCGTTGATGTCAAGAAACGGAAAAAGGACAGGTTTAATATTAAGGAACGAGTGTCCAATTTTAGATATAATCTTGCTTTAAGAGGGAGGCTTTTTGGTAGAAGGGTTCAATCAATGGTGGAATCACGTGGCAATGAGTATGGTCCCATGGTGAGAGATTTCACAAGTGGACCAACAGTTCTTATGAACTGCGGTGAGCGGCATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCAGCAGCATGCATGAAGACCTTTGGAGGCGGACTGAATATTTAAGTCCAATATCAACTCCGGATGTGTCTTCAAGAGATGATAATGTTGTGCCCCAGGTTTTCAGGGATATCAGCTCTGGTTTGAATGAACTAAGGAGGCAACTTAATCAACTTGAATCTGATGGTCCTGATGACTTCACTATAAAACAGGAGGCCGCTGAGTCTGACTTGGACCAATTAGAGGATCCAGCAGAATCTTACATAAGAGATCTACTTGTTGCTTCTGGACTGTACTTTGGTTCATGGGATAAGTCTTTATTAAGAGGGGACACATTTGCAAAGCCTATTGGCAACTCGGTTTATGAAGAAGTGGAAGAATCTCGCAGTAAATGGGTCAAGGAAAATGATGACAGCTGTATGAAGGATCACAATGAGAATAAGCTAGACCACAAAGTTTTACTTGATTTGTTAAATGAGGCACTTTCACTTGTTCTTGGACCTCCATTGACATTGTCTAGATTCAGAAGGAATTTAAGTAACTCTTCCATGTTGCCACCTTCTGGAAAGGAACTATTGAACTTAGTGTGGGACATTATCCGTGTTTCTTTATATCCTCCATCTGACATATCTACTTATTCACTTGATACTTTGGTGGCTCAACACCTAGGATCCATCCCTTGGTCTGAATTAATACATGATGAGATCAATATTTTGGAACGAGATATAGAATGTCTAATAACTGAGGATCTGGTTGAAGAACTCACAAAGGACATATATTCTAAGATGAAGTGA 2703 0.4169 MGGLLHFFEFNQGRMAKKVLTRKRHHGGLEAPRNSLDLQVQTPQNFCPQRELSCNYQVEEEGRPENNRYSNVGSMKKLINEELSKQSSTRQNAPSLVARLMGIDTMPLDTKYVVPSDKRISENVGKKSSEKGVSRRGSSVSWGSSNFNSSSQMDFESLYEDMDVVDDDDGWNKSFGEPRRRDHPQDEELQKFKKEFEAYQAARFLECSKVAEIGGVPRRLFVQQNLNKEKVVHNELLSQRAAAGKLADLDNHSFKTPPPEIYGSEYRGDTMELVPATQRKTFPPRSRTLSRDFEESLLMKSCNRLDTSASPTRIVILKPGPDSICNHEENWTISTGTIQGRNSIEDFLEEVKERLKCELQGKIVKKVSVVRGSGIETPYNEKPSDPKLIARHIVKQVRESTTRDADTNLLHSESTGSFKSEMQFNGPTSPEIISRDTRKFLSDRLRNVVRSQAHADFPEGKSRSLALDSHKAGLKQVGDIMKYASNWEISKEEAEMQTGSFRHELDENIFLHKDLSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAQIRRKLEAVETMSVDVKKRKKDRFNIKERVSNFRYNLALRGRLFGRRVQSMVESRGNEYGPMVRDFTSGPTVLMNCGERHENSTEVPPSPASVCSSSMHEDLWRRTEYLSPISTPDVSSRDDNVVPQVFRDISSGLNELRRQLNQLESDGPDDFTIKQEAAESDLDQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVYEEVEESRSKWVKENDDSCMKDHNENKLDHKVLLDLLNEALSLVLGPPLTLSRFRRNLSNSSMLPPSGKELLNLVWDIIRVSLYPPSDISTYSLDTLVAQHLGSIPWSELIHDEINILERDIECLITEDLVEELTKDIYSKMK 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00761 900 Coils Coil 678 698 - -
Phco4g00761 900 MobiDBLite consensus disorder prediction 120 145 - -
Phco4g00761 900 Pfam DUF761-associated sequence motif 89 107 IPR032795 -
Phco4g00761 900 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 895 - -
Phco4g00761 900 Pfam Domain of unknown function (DUF4378) 723 890 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00761 Phco-Chr4 5867000 5871376 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00761 4 5867000 5871376 Phco4g00761 4 5867000 5871376 ECH
Phco4g00761 4 5867000 5871376 Phco8g00327 8 3029881 3035722 PCT