Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00247 ATGCCCATATCCTCAGAACTCCCTGAGGAAATGGCCCTCACCATCAAGTCCAGAAAATCCACTTCACCTTCGAACTTTTACTTTTGCACCACTCTTTTCTTCATTGTCCTCTTCACTATACCTGTTTTTTTCCTCCTCCATACCCCAACCACCACCTCCATATGCACCACCCTTGCTTCCTCCCAAAATAAAACTTGGTCAGGTGATCTTCAGTTGGTTGAATTTGCATGGAACCGCCTCTCCTTTTTTGAGCACAACACACCACCCTTTGCCCTCAAAATTGCTGTCTTCTCCAGGAAGTGGCCTATTGGCACAACCCCTGGTGGCATGGAGCGCCATGCTCACACCCTTCACACTGCTTTAGCACGCCTTGGCCATCAGATTCATGTCTTTACATCTCCACCACAAGATGAAAGCACTTCAATCTCATCCTCTGAGGTAAACAAAAACAGCCATCAAGAAGGTGCACCTTCTTCCCCTTACATTCATTTCCATGAAGGTGAGCCTGGCAGGTGGCGCTATAACAAGGCATGGGAGCAATTTGTTGAAGAAAACCGCAGAGAACCATTTGATGTTGTGCACTCAGAAAGTGTGGCACTCCCTCATTGGCTAGCACGCAACATGTCAAACCTTGCAGTGTCTTGGCATGGCATAGCCCTCGAGAGCTTGCAATCAAGCATTTTCCAGGACTTGGCTCGCCAGCCAGATGAGCCCATGTCCCCTCTTTTCAACAAAAGTATACAGGGTGTTGTGCCAAAGGTGCTGAATGAGATAAGGTTCTTCAGGAATTATGCGCATCATGTTGCTATCAGTGATAGCTGTGGTGAGATGCTCAGGGATGTGTACCAAATTCCTAACAGAAGAGTTCACGTAATACTAAATGGTGTTGATGAGGATGACTTTAGAGAAGATGTAGAATTGGGAAGGGAATTCAGAAGAAAAATTGGCATTCCAGGGAATGCAAGTTTGGTACTTGGTGTTGCTGGAAGATTAGTGAAGGACAAAGGCCATCCTCTGCTTCATGAAGCTTACTCAAGGCTTATAACCAAGTACCCTGATGTGTACTTGATTGTTGCTGGTTCTGGACCATGGGAGAACAGGTACAGGGATTTCGGGAGTCAGGTTCTTGTTCTGGGATCGATGAGTCCTTCCATGTTAAGAGCGTTCTACAATGCAATTGACATTTTTGTCAATCCCACACTCAGACCACAAGGGCTTGACCTTACATTGATGGAGGCAATGATGAGTGGGAAACCACTTTTGGCATCAAGATTTCCAAGCATTAAAGGGACTATTGTGGTTGATGATGAATATGGTTACATGTTTTCCCCTAATGTGGAGTCCCTCTTGGAGGCACTGGAAGCAGTGGTAAAGGAAGGACCGCAGAGGCTAGCAATGAGGGGCAAGGCATGTCGCGAATATGCTGCCAAAATGTTTACAGCAAGAAAGATGGCATTAGCATATGAGAGGTTATTCTTGTGTATAAAAAATCACACCTTCTGTGCCTATCCTTGA 1515 0.4581 MPISSELPEEMALTIKSRKSTSPSNFYFCTTLFFIVLFTIPVFFLLHTPTTTSICTTLASSQNKTWSGDLQLVEFAWNRLSFFEHNTPPFALKIAVFSRKWPIGTTPGGMERHAHTLHTALARLGHQIHVFTSPPQDESTSISSSEVNKNSHQEGAPSSPYIHFHEGEPGRWRYNKAWEQFVEENRREPFDVVHSESVALPHWLARNMSNLAVSWHGIALESLQSSIFQDLARQPDEPMSPLFNKSIQGVVPKVLNEIRFFRNYAHHVAISDSCGEMLRDVYQIPNRRVHVILNGVDEDDFREDVELGREFRRKIGIPGNASLVLGVAGRLVKDKGHPLLHEAYSRLITKYPDVYLIVAGSGPWENRYRDFGSQVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGTIVVDDEYGYMFSPNVESLLEALEAVVKEGPQRLAMRGKACREYAAKMFTARKMALAYERLFLCIKNHTFCAYP 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00247 504 CDD GT4_PimA-like 93 492 - -
Phco8g00247 504 PANTHER GLYCOSYLTRANSFERASE 25 504 - -
Phco8g00247 504 Gene3D Glycogen Phosphorylase B; 92 304 - -
Phco8g00247 504 Pfam Glycosyltransferase Family 4 108 299 IPR028098 -
Phco8g00247 504 Pfam Glycosyl transferases group 1 313 467 IPR001296 GO:0016757
Phco8g00247 504 MobiDBLite consensus disorder prediction 134 162 - -
Phco8g00247 504 Gene3D Glycogen Phosphorylase B; 305 475 - -
Phco8g00247 504 MobiDBLite consensus disorder prediction 134 157 - -
Phco8g00247 504 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 93 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00247 Phco-Chr8 2313846 2315360 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00247 8 2313846 2315360 Phco8g00247 8 2313846 2315360 ECH
Phco4g00679 4 5128033 5129493 Phco8g00247 8 2313846 2315360 PCT