Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00679 ATGGCCTTCAACAACAAATCAAAGAAGTCCAGTTCCCCTTCTAATTTTTCTTTCTGTGTCACCCTTTTCTTCCTTGTCCTCTTCACCATACCAGCATTTTTCCTCCTCCACACACCCACCACATGCACCACCCTCTCCAAAACCTGGTCAGGTGATCTTCTTTTAGCCAAATTTGCATGGAACAAACTCCCATTTCTGGAACACAACCCTTCACCCGTACCTCTCAAAATCGCTGTCTTCTCTAGAAAATGGCCTATTGGAACCACTCCTGGTGGCATGGAGCGCCATGCATACACACTTCACACTGCTCTAGCTCAGCGGGGCCACAAGGTTCATATATTCACCTCTCCTCCACAAGAAGAAACCACTTCAACCTTCTCTTCAGACACAACCAATCACCAAGCAGATGTTAATGCACCCTCTTCACCCTTCATCCATTGCCATGAAGGGGAGCCAGGCAAGTGGCGCTACAACAAAGCATGGGAACAGTTTCTGGAACAAAACCAGAAAGAACCCTTCGATGTTGTTCACTCAGAAAGTGTAGCACTTCCTCACTGGCTCGCTCGGGACCTTCCAAACCTTGCAGTTTCATGGCATGGCATAGCCCTTGAGAGTTTGCAATCTAGCCTTTTCCAAGACTTAGCTCGTAGAACTGATGAACCTAGATCCCCGGATTTTGAAAAAGGCTTACAAGGGGTTCTCCCTAAGATTCTAAATGAGATAAGGTTCTTCAGAAACTATGCACACCATGTTGCTATCAGTGACAGTTGTGGTGAGATGTTAAGAGATGTGTACCAAATCCCCAGCAGAAGAGTGCATGTGATTCTCAATGGAGTTGATGAGGGTGACTTCAGAGAAGACGTGGAATTGGGAAGGGAATTTAGAACCAAAATTGGCATTCCAAGCAATGCTAGTTTAGTGTTTGGTGTCGCTGGAAGATTAGTGAAGGACAAAGGCCACCCTCTCCTTCATGAAGCATACTATAGGCTAATAACAAAACACCCCAATGTGTATTTGATTGTAGCTGGCTCAGGACCATGGGAGAATCGATATAGGGATTTAGGAAACCAAGTTCTTGTTCTTGGATCCATGAGTCCTTCCATGCTACGAGCATTCTATAATGCCATTGACATTTTTGTCAATCCTACCCTTAGACCACAAGGGCTTGACCTTACTCTGATGGAAGCCATGATGAGTGGGAAACCCCTTTTGGCATCAAGGTTTCCAAGCATCAAAGGTAGTGTTGTGGTGGATGATGAATTTGGCTTTATGTTCTCTCCCAACGTGGAATCCCTCATGGAGGCACTTGAAGCAGTGGTGAAGGAAGGAAAGGAAGGGCTTGCAAGGAGGGGAAAGGCATGCCGTGAATATGCAATTTCTATGTTTACAGCAACAAAGATGGCGTTGGCATATGAGAGACTATTCCTATGCATAAAAGAAGATAAATTTTGTAACTATTGA 1461 0.4504 MAFNNKSKKSSSPSNFSFCVTLFFLVLFTIPAFFLLHTPTTCTTLSKTWSGDLLLAKFAWNKLPFLEHNPSPVPLKIAVFSRKWPIGTTPGGMERHAYTLHTALAQRGHKVHIFTSPPQEETTSTFSSDTTNHQADVNAPSSPFIHCHEGEPGKWRYNKAWEQFLEQNQKEPFDVVHSESVALPHWLARDLPNLAVSWHGIALESLQSSLFQDLARRTDEPRSPDFEKGLQGVLPKILNEIRFFRNYAHHVAISDSCGEMLRDVYQIPSRRVHVILNGVDEGDFREDVELGREFRTKIGIPSNASLVFGVAGRLVKDKGHPLLHEAYYRLITKHPNVYLIVAGSGPWENRYRDLGNQVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGSVVVDDEFGFMFSPNVESLMEALEAVVKEGKEGLARRGKACREYAISMFTATKMALAYERLFLCIKEDKFCNY 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00679 486 PANTHER GLYCOSYLTRANSFERASE 15 486 - -
Phco4g00679 486 Gene3D Glycogen Phosphorylase B; 74 296 - -
Phco4g00679 486 Pfam Glycosyl transferases group 1 306 444 IPR001296 GO:0016757
Phco4g00679 486 Pfam Glycosyltransferase Family 4 91 281 IPR028098 -
Phco4g00679 486 CDD GT4_PimA-like 76 475 - -
Phco4g00679 486 Gene3D Glycogen Phosphorylase B; 297 458 - -
Phco4g00679 486 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 76 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00679 Phco-Chr4 5128033 5129493 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00679 4 5128033 5129493 Phco4g00679 4 5128033 5129493 ECH
Phco4g00679 4 5128033 5129493 Phco8g00247 8 2313846 2315360 PCT