Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00242 ATGGAACAATATTCAAATTGCTCGTGTTATCAAAATCCTAGTGTAAGAATCATCCAATGGTTAAATCTTGTAGCCTGTGTACTGCTATTGCTTAAGGCAGAAGGGTCTTTGGTTCCATTGACCTTGGTCGAGAATGCACTGTCGAAAGGAGCTGTTTGTTTGGATGGAAGTCCCCCAGCTTACCACTTTGATAAGGGAGATGGAGAAGGGATTAACAACTGGATTGTTCACATGGAGGGAGGAGGATGGTGCAAAGATGCCGACGATTGCCTTGGGCGTAAGGACACTCGCTTAGGCTCATCCAAGCAAATGGTTGAGGATCTTTACTTTTCTGGAATTTTAAGCAACGAGCGACAGTATAATCCAGATTTCTACAATTGGAATAGAGTGAAGATTAGGTACTGTGATGGGTCATCGTTTACTGGTGATGTGGAAGAAGTTGATCCAACAAACAATCTGTACTTTAGAGGAGCAAGGATTTTTTCAGCTGTAATGGAAGATTTATTAGCAAAAGGCATGGAGAAGGCTGAAAATGCTATTCTCTCGGGCTGTTCAGCTGGAGGATTGACTACTATATTACACTGTGACAATTTTAAAGCTCTGTTGCCTTCTGGAGCTACTGTAAAATGTGTTCCAGATGCTGGTTATTTTATCAATGTAGAGGATATCTCAGGAGCACGTTTCATTGAAGATTATTACAGTAAAGTTGTGTCGACACAGGGCTCAAAAAAGAATTTGCCCACATCTTGCACTTCCAAACTCAGCCCAGGACTGTGCTTTTTCCCACAATATGTGGCATCACATATCAGTACCCCAATCTTCATAGTAAATTCAGCCTATGACTCATGGCAGATTCGGAACATCTTGGCACCTGGTGCTGCTGATCCCAGTGACAGTTGGCATAGCTGCAAGCTTGATTTAACCAAATGCTCACCTGATCAACTAAGTATAGTGCAAGGGTTCAAGAAGGAATTCGAGAAGGCGGTGAGTGTGGTTGGAGACTCTCCATCCAGCGGAATGTTCATAGACTCTTGCTATGACCACTGCCAAACAGAATCACAGGAGACATGGTTTAAAAGTGACTCACCTCATCTTGCCAATACAACAATTTCCAAGGCAGTAGGGGACTGGTTTTATGATCGAAGTCCTTTCCATCATGTAGATTGCAACTATCCTTGCAACCCCACTTGTCAGAACGCTGTTTCTGATCTAAAAGACCACCCAGGAATATAG 1233 0.429 MEQYSNCSCYQNPSVRIIQWLNLVACVLLLLKAEGSLVPLTLVENALSKGAVCLDGSPPAYHFDKGDGEGINNWIVHMEGGGWCKDADDCLGRKDTRLGSSKQMVEDLYFSGILSNERQYNPDFYNWNRVKIRYCDGSSFTGDVEEVDPTNNLYFRGARIFSAVMEDLLAKGMEKAENAILSGCSAGGLTTILHCDNFKALLPSGATVKCVPDAGYFINVEDISGARFIEDYYSKVVSTQGSKKNLPTSCTSKLSPGLCFFPQYVASHISTPIFIVNSAYDSWQIRNILAPGAADPSDSWHSCKLDLTKCSPDQLSIVQGFKKEFEKAVSVVGDSPSSGMFIDSCYDHCQTESQETWFKSDSPHLANTTISKAVGDWFYDRSPFHHVDCNYPCNPTCQNAVSDLKDHPGI 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00242 410 PANTHER NOTUM-RELATED 22 399 IPR004963 GO:0016787
Phco8g00242 410 Pfam Pectinacetylesterase 32 383 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00242 Phco-Chr8 2279867 2289937 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00242 8 2279867 2289937 Phco8g00242 8 2279867 2289937 ECH
Phco4g00684 4 5170647 5175611 Phco8g00242 8 2279867 2289937 PCT