Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00684 ATGGAGGGTGGGAGAATAAGACAGTGGTTGAACCTTCTGGTGTGTGCACTGCTGTCGCTGATGGCAGAGGCTTCTTATGTGCCAATCACCTATCTTCAGAACGCGGTAGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCATTTTGACAGGGGATCTGGAACAGGGATTAACAATTGGTTGGTTGCTTTTGAGGGAGGAGGATGGTGCAACAATGTCACCACTTGCCTCTCTCGCAAGACCAATCGTCTAGGTTCATCTAAGCAAATGGCAAAGCAAATTGCCTTTTCGGGAATTATGAGTAACAGGCCAATGTTTAATCCAGATTTCTACAACTGGAACAGAATCAAGGTTAGGTATTGCGATGGTTCATCTTTTACTGGTGATGTAGAAGCAGTCAATCCAGTTACTAAGTTGCACTTTAGGGGAGCAAGAATTTTTGCTGCTGTCATGGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCGAAATGCTATTATTTCTGGATGTTCAGCTGGAGGATTAACTGCAGTACTGCATTGTGATCGCTTCCAAGCTCTATTACCTAGAGAAGCAAGAGTGAAATGCGTCTCAGATGCTGGTTATTTTATCAATGCAAGGGATGTCACCGGGGCATACCACATTCAACAGTACTTCAGTCAAGTTGTTGCTACACATGGCTCTGCAAGGAATTTGCCTCAGTCATGCACTTCGAGACTTAGCCCAAAGCTGTGCTTTTTCCCACAATATTTGGTGTCACATATCACTACGCCAATCTTCTTTGTAAACGCGGCATACGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTGAAGGCCACTGGCATAGCTGTAAGCTTGATATAAACAACTGCTCACCTGATCAACTCGATCTAATGCAAGGCTTCAGGACAGAATTCTTAAGGGCGTTGACTGTGCTTGGCAACTCTTCATATAAAGGAATGTTTATAGACTCTTGCTATGCCCACTGCCAAACTGAAATGCAGGAGACATGGTTGAGAAGTGACTCTCCAGAGCTGGAAAAGACAACAATTGCAAAGGCTGTAGCAGACTGGTTTTATGAAAGAAGGACTTTCCATAAGATAGATTGTCCTTACCCCTGCAACCCCACTTGTCACAACCGCGTTTTGGAACCACAAGACAATCACCAAGGAAAAAATGTGACCTCGAAAGGAACATCAGGTGCATCAGCCAGAAAGCTCAATCTTCCGAAACTAACAAACAAGGTACAGTGGATTGAGCTCGTGTGCATTAATGGAGGGATCAATGGGCTTCTACTAACGTTGGGTCTTATGACTGCAATAAATTCCAGACACAGCTTCATAATTAGATTCAGTCAGAGTAAGCTTGAACTTAGGTAA 1404 0.4395 MEGGRIRQWLNLLVCALLSLMAEASYVPITYLQNAVAKGAVCLDGSPPAYHFDRGSGTGINNWLVAFEGGGWCNNVTTCLSRKTNRLGSSKQMAKQIAFSGIMSNRPMFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARIFAAVMEDLLAKGMKNARNAIISGCSAGGLTAVLHCDRFQALLPREARVKCVSDAGYFINARDVTGAYHIQQYFSQVVATHGSARNLPQSCTSRLSPKLCFFPQYLVSHITTPIFFVNAAYDSWQIKNILAPGVADPEGHWHSCKLDINNCSPDQLDLMQGFRTEFLRALTVLGNSSYKGMFIDSCYAHCQTEMQETWLRSDSPELEKTTIAKAVADWFYERRTFHKIDCPYPCNPTCHNRVLEPQDNHQGKNVTSKGTSGASARKLNLPKLTNKVQWIELVCINGGINGLLLTLGLMTAINSRHSFIIRFSQSKLELR 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00684 467 PANTHER NOTUM-RELATED 15 388 IPR004963 GO:0016787
Phco4g00684 467 Pfam Pectinacetylesterase 22 372 IPR004963 GO:0016787
Phco4g00684 467 SUPERFAMILY alpha/beta-Hydrolases 143 272 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00684 Phco-Chr4 5170647 5175611 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00684 4 5170647 5175611 Phco4g00684 4 5170647 5175611 ECH
Phco4g00684 4 5170647 5175611 Phco8g00242 8 2279867 2289937 PCT
Phco8g00243 8 2290134 2295445 Phco4g00684 4 5170647 5175611 PCT