Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00240 ATGTCGGTGGTTCTGAGAAAAAGACTAGGTTGCTGCACTAAGGAAACCAAAATCAGCATTGATTTTGATGTGCCAGAGAGTATTGTGACATATAATGGCCTTGAGAGTTGCCCTTCAGATAATCGTTCTTATGGAGATGAAAGCAGAACGAGTAGAGGAGATGGATGTATAACTGATTCATTTATTGATGATGACTCCAGTTGTTGTTCATCCAGTAAAGATGCTTTTGGATCATTCTCTTCAAAATGTTTGACAATAAAAAGAGATGAACAAGGATTGGAAGAGTGGGAACTCTCAGAAAGTCCTCCAAATTTTTATCTTAAAGACAAGTCTGCTTTTGACGTCCAAAGTTCAGATGTAGAAGCCATGAAGGAGAAGTTTGCAAAGCTGTTGCTAGGTGGTGATGTTACAGGAGGATCAAAAGGCCTCAATACAGCTTTAGCACTGTCTACTGCTATCACAAGCCTTGCAGTGACGGTTTTTGGTGAGTTGTGGAAATTGGAACCACTGTCTGAAGAAAGGAAAAGCAAATGGCAAAGAGAAATGGGATGGTTGTTGTTTCCCGCTAACTATATGGTTGAGTTAGTTCCTGCTAAGCAAAATGGTGCAAATGGTGGAATCTTCGAGGTAATGACCCCAAAAGCCCGTGCTGACATCAAAATGAATCTTCCAGCACTTCAGAAGCTGGACTCAATGCTTATTGAGACACTAGAGTCGATGGTGAATACCGAGTTTTGGTATGCAGAGGAAGGAAGCCGGTCAGAAGGGAGGAACACAACTGGAAGACAAAGCAAAAGATGGTGGCTTCCATCACCCCGAGTACCAAGAACTGGACTTTCTGAAGTTGAAAGAAAGAGGCTACTTCATCAAGGAAGGATAGTACATCAAATATTCAAGGCTGCCAAATCAATCAATGATAATATGTTGCTTGAGATACCCGTGCCAACAGTAATTAAGGATGCACTTCTGAAGAGTGGAAAGGCAAGCCTGGGAGATGAACTGCACAAGGTTTTGATGGCTGAATCGAGTTCTGGAGAAGAAATGCTTAAAGCTCTAAATTTGAAATCTGATCATGCTATCCTAGAGACCATTAATAAATTGGAAGCTGCTACGTTTTCATGGAAAGAAAGAATCATACAAGAAAATAGTGGCAAATCCCCGATTCGAACCCCATGGTCCTTCCTGAAGGACCCTGTGTCAGGTATAGATAAGATGGAACTATTGTTGGAACGTGCAGAAACACTTCTAAGTCTGCTTAAAACCAGACATCCAAACCTTCCTCAAACATTTCTGGATGCTGCAAAAGTTCAATATGGCAAGGATATTGGGCATTCCATATTGGAAGCATACTCTAGAGTTCTTGGAAGTTTAGCCTTTAGCATACTGTCTAGAATAGGAGATATATTGCAAGAGGATGCTTTAAGCAATCCCAATTCACCTATCTCAATAACTCACTCTCCTGGGACAAATCTCTCTGAAGCTTGGGTGGTTGGTTCACGTATCAGACACTCTTTAATAGACAAGATGAATGAGACAGATGGACAACATTGTGGTTCCAGTTGTGGCAGTACTTCTGATGTAGAACTCCCATCTACTGAGGCCACTGCCAACATTGTAACAGCCACTCCAAGCCGTGGTCGATTGTGGTGCATTGGTAGAAACTTGTAA 1668 0.4173 MSVVLRKRLGCCTKETKISIDFDVPESIVTYNGLESCPSDNRSYGDESRTSRGDGCITDSFIDDDSSCCSSSKDAFGSFSSKCLTIKRDEQGLEEWELSESPPNFYLKDKSAFDVQSSDVEAMKEKFAKLLLGGDVTGGSKGLNTALALSTAITSLAVTVFGELWKLEPLSEERKSKWQREMGWLLFPANYMVELVPAKQNGANGGIFEVMTPKARADIKMNLPALQKLDSMLIETLESMVNTEFWYAEEGSRSEGRNTTGRQSKRWWLPSPRVPRTGLSEVERKRLLHQGRIVHQIFKAAKSINDNMLLEIPVPTVIKDALLKSGKASLGDELHKVLMAESSSGEEMLKALNLKSDHAILETINKLEAATFSWKERIIQENSGKSPIRTPWSFLKDPVSGIDKMELLLERAETLLSLLKTRHPNLPQTFLDAAKVQYGKDIGHSILEAYSRVLGSLAFSILSRIGDILQEDALSNPNSPISITHSPGTNLSEAWVVGSRIRHSLIDKMNETDGQHCGSSCGSTSDVELPSTEATANIVTATPSRGRLWCIGRNL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00240 555 FunFam Rop guanine nucleotide exchange factor 14 345 481 - -
Phco8g00240 555 Gene3D PRONE domain, subdomain 1 349 481 - -
Phco8g00240 555 Gene3D PRONE domain, subdomain 1 112 348 - -
Phco8g00240 555 FunFam Rop guanine nucleotide exchange factor 14 112 343 - -
Phco8g00240 555 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 39 497 IPR038937 GO:0005085
Phco8g00240 555 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 118 476 IPR005512 GO:0005085
Phco8g00240 555 ProSiteProfiles PRONE domain profile. 110 482 IPR005512 GO:0005085
Phco8g00240 555 Coils Coil 402 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00240 Phco-Chr8 2266163 2271495 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00240 8 2266163 2271495 Phco8g00240 8 2266163 2271495 ECH
Phco4g00691 4 5217889 5223651 Phco8g00240 8 2266163 2271495 PCT