Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00691 ATGTTGAGGATGAGAAAAAGACTAGCATGCTGCACCAAGGGAAAGAAATTTAGCATTGATCTTGATGAGAAAGAGAGGATTATGACATATAATGGCCTTGAAAGTTGCTTGCTGAATAACCAGTCTTACGAAGATGAGAGCAGAACGAGCAGAGGAGATGAATGCATAACTGATTCATTTGATGATGACACCAGTTGTTCCTCCAGCAAGGATGCTTTTGGATCATTCTCTTCAAAATGTTTAACGATGAAAAGGGATGATAAAGGACTGGAGGAATGGGAGCTCTCAGAAAGTCCTCAAGATTTTTATGTCAAAGATAAGCCTTATGGTATGGAACATTCTGATATAGAAGCCATGAAGGAAAAATTTTCGAAGCTTTTGCTAGGTGAAGATGTTACAGGAGGAAACAAGGGCATCAGTACAGCTTTGGCGCTATCTAATGCCATCACAAACCTATCAGTGACGGTTTTTGGAGAGCTGTGGAAATTGGAACCACTATCTGAAGAAGGGAAGGAAAAATGGCAAAAAGAGATAGACTGGTTATTGTCTCCTACCAACTACATGGTTGAGCTAGTTCCCGCTACGCAAAGCAATGCCAGTGGTGGGATTTTTGAGATAATGACCTCAAAAGCTCGTGCAGACATCCTCATGAATCTTCCAGCACTTCAGAAGTTGGATTCTATGCTGATTGAGGCACTAGATTCCATGATGAATTCGGAGTTTTGGTATGCAGAGGGAGAAAGCCGGGCTGAAGGGAGGGACTCAAATGCAGAGCATAGCAAAAAATGGTGGCTTCCATCGCCCCAAGTACCAAAAAGTGGTCTTTCTGATACTGAAAGAAAGAAGCTGCTTCATCAGGCTGGGGTGGTACGTCAAGTTTTCAAGGCTGCCAAATCCATCAATGAAAGTGTTTTGCTTGAAATGCCTGTGCCAGCCATTATTAAAGATGCACTTGCAAAGTCTAGAAAGACAAACCTTGGACAGGATTTGCACAAGGTTTTGACGGCTGAACCCAGCTCTGCAGAAGACATGCTTAAATCGCTCAACTTGAAATCTGAACATGTTGTCCTAGAGACTGTTAATAGACTGGAAGCTACTATATTCTCATGGAAAGAGAGAATTGCAGAACAAGTTAGCGGCAAACACCCAGTTAGATCCTCGTGGTCACCTTTTATGAAGGATCCTATGTTAGAGCTTGACAAACTAAAGTTATCATTGGACCGTGCCGAAACACTACTCCAGCTGATTAAAATCAGATACCCAAACCTTCCTCAAACATTTCTCGATGCTACCAAAGTTCAATATGGCAAGGATATTGGACATTCTATTTTGGAAGCATATTCCAGAGTTCTAGCAAATTTAGCCTTCAGCATGCTGTCTAGAATAGGAGATATCTTGCAGGAGGATTCTTTAGGCAATCCAAATTCACCTGTGGTGATAGATTACTCTCCTGGGATGAATGTTTCTCAAACTTGCGTGGTGGATTCACACATCAAGCAGTCCTTACTTGATAAGATGAACAAGGCAGATAGGCAATATTCTGATTATTCTCGCTGTTATAGTACTTCTGATCTAGAACATTCATCTATTCATTCCAAATCTATAACAGCCACGCGAAACCAGAGTGGTGGCTGGTGCATTAGTAGAGAAGTTTGTTCAAGTCTGTCTCCTAGAAATTCTCCATAG 1686 0.4164 MLRMRKRLACCTKGKKFSIDLDEKERIMTYNGLESCLLNNQSYEDESRTSRGDECITDSFDDDTSCSSSKDAFGSFSSKCLTMKRDDKGLEEWELSESPQDFYVKDKPYGMEHSDIEAMKEKFSKLLLGEDVTGGNKGISTALALSNAITNLSVTVFGELWKLEPLSEEGKEKWQKEIDWLLSPTNYMVELVPATQSNASGGIFEIMTSKARADILMNLPALQKLDSMLIEALDSMMNSEFWYAEGESRAEGRDSNAEHSKKWWLPSPQVPKSGLSDTERKKLLHQAGVVRQVFKAAKSINESVLLEMPVPAIIKDALAKSRKTNLGQDLHKVLTAEPSSAEDMLKSLNLKSEHVVLETVNRLEATIFSWKERIAEQVSGKHPVRSSWSPFMKDPMLELDKLKLSLDRAETLLQLIKIRYPNLPQTFLDATKVQYGKDIGHSILEAYSRVLANLAFSMLSRIGDILQEDSLGNPNSPVVIDYSPGMNVSQTCVVDSHIKQSLLDKMNKADRQYSDYSRCYSTSDLEHSSIHSKSITATRNQSGGWCISREVCSSLSPRNSP 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00691 561 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 114 471 IPR005512 GO:0005085
Phco4g00691 561 FunFam Rop guanine nucleotide exchange factor 14 341 478 - -
Phco4g00691 561 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 22 514 IPR038937 GO:0005085
Phco4g00691 561 Coils Coil 399 419 - -
Phco4g00691 561 Gene3D PRONE domain, subdomain 1 109 345 - -
Phco4g00691 561 Gene3D PRONE domain, subdomain 1 346 479 - -
Phco4g00691 561 FunFam Rop guanine nucleotide exchange factor 14 108 339 - -
Phco4g00691 561 ProSiteProfiles PRONE domain profile. 106 479 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00691 Phco-Chr4 5217889 5223651 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00691 4 5217889 5223651 Phco8g00240 8 2266163 2271495 PCT