Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00234 ATGAACAGAACAAACATGGAAAACAATGGGGAAAGCCATAGTAGAAGTGGTAGTTTCAGGATGGGGTTTGGGTTGAGTGTGAACGAGGCAAAAGTTCACACTGTGCTTCAGCTTCCTACTGTTCATACACACTCTAGTCTTCTCCAACATGGTGATGGTGATGGAGATGTCGGTGAGGAGAGAGAGAAACTCCAAAAACCTCTCACAAACTCTCTCTCTCCTAGGCAGATGAAGTCCCTAGTTGCTCTCTGCGACACCATCATACCTTCCATCGACAACAACGTTGTTCGCTCCTCCGATGAATCTGTTGCCAACTTCTACAAGACTTCAGCTTCCATGGCTGGAACACCTGAACATGTTGGGAAATTGATAAGTGAGAAAGTGAAGCACCCAAGTAGATGGCTGTTTCTGTTGACACTGTGGGTACTGTCAACATGGTTTGGGACGTTGATACTGTGTGGGATGGCGAGTATCTCATCAAGCTTTCCCTTCTTCCATAGCTATCCTGAAATGTCTCTGCTCAAACGCCAAAGAGTTATGCAGTCTTGGTCTCTCAGTTACCTTCGTCCCCTTAAGATGTTTTTCAGAACTATAAAGCTTCTCACTCTCCTTACCTTCTTCACTCAGGTAAATGAAGCAGAAGAAAACCCATCATGGAAGGCAATTGGCTATTGTGGACCTGATCCAGAGTTCAAAGCACAGTTGAAGAACCACTTCTTGCATAGAACATCGAAGGAAGAAGAACACGAAAAAAAAGATGATGATGATGATGATGATGAAGAGTTCAGAGGCCCTCTTCACAAAGGCCTTGTCCATTTAAACTATCCACGAGACATGATTAAAAATTCTCTAAGACAATTTGGATTCTCTGTCTCTACCACATCTAAAAAGCATGATGCTTCCAACCTGTCATCACCTTCTTTAGTTATCCAATGTGATGCAGTGGTTGTTGGTTCTGGCTCTGGTGGTGGGGTAGTAGCTGGAGTTCTAGCAAATGCTGGTTATAAAGTGCTGGTCTTGGAGAAAGGAAGCTATTGTGCTAGGAACAATCTTTCCCTTCTTGAAGGACCAAGCATGGATCAAATGTACCTCTCCAATGGTTTGGTTGCAACAAAGGATATGTCTGTCCTAATACTAGCTGGATCCACTGTTGGTGGTGGGTCTGCAGTGAACTGGTCAGCCAGCATTAAAACTCCTCAACATGTATGCAAGGAGTGGTGTGATCGCCATGAGCTAGAACTGTTTGAAAGTAAGTTGTACAAAGAAGCCATGGATGCTGTGTGTGACAAAATGGGAGTCCAATCTGAGGTTGAAGAGGAAGGGTTCAACAATGAAGTCCTGAGAAGAGGGTGTCTAGAAATGGGATATCATGTGTGCAACATTCCAAGGAATGCTTCATCGGATCACTACTGTGGTTGGTGCTGCATGGGGTGTAAGGATGGAAAGAAGAAGAGTACATCAGAAACATGGCTAGTGGACTTGGTGAAATCAGGTAATGGAGCAATCATTCCAAGTTGTGAGGCCATACAAGTCTTGCACAAGAAAAAGAAAGGAAGTGAGAGAAAAATAGCTCGCGGAGTGGCTTTTGCAATTGAATACAAGGGAAAGAAGGACATTTGTGTAGTGGAGTCCAAGGTCACAATTGTAGCATGTGGAGCACTCAGTACTCCAGCATTACTTAAGAAAAGTGGATTGAAGAATAAGAACATAGGAAAGAACTTGCACCTTCATCCTGTGACAATGGCTTGGGGCTACTTCCCTGATTCATCTTCACCTAAGATGTGGCCAGAGAAACATAAGAAGAGCTATGAAGGAGGGATTATGACAGCAATGTCCACAGTTGTTGCACAGTTTGACAAAACTGGATATGGTGCAGTGATCCAAACACCTTCATTGCATCCTGGTATGTTCTCAATTCTAATGCCTTGGACTTCTGGCAAAGATATGAAAGATAGAATGCACAAGTTTTCTAGAACAGCTCATGTATTTGCACTGGCAAGGGACCAAGGGTCAGGAACAGTGAATTCACCATCTCTTATAAGTTATCAGTTGAAAGATGTGGACAAAGAGAATTTAGAGACAGGAATTGAGAAGGTGCTGAGAATTCTTGCAGCAGCTGGAGCTGAAGAAATTGGGACGCACAATAACAAGGGTAGGAGCATAAATGTTAAGCAGGTGAGCTATCATGAGTTTGAGAAATTTGTAAAAGAAGAAAGTTCAATGTCTTTAACAGACCTTACAACACCATTGTGTTCAGCACATCAGATGGGAAGTTGTAAGATGGGCACTAATCCAAGTGACTCAGTTGTGAACCAAATGGGAGAGACATGGGAAATGGAGGACCTTTATTTGGCAGACACAAGTGTCTTTCCCACAGCTTTGGGTGTGAATCCAATGGTCACTGTTCAGGCTATTGCTTACTGTACAGCACAGTATGTTGCTGAAGTTCTTAGAAGAAAGAGAAAGTGA 2469 0.4322 MNRTNMENNGESHSRSGSFRMGFGLSVNEAKVHTVLQLPTVHTHSSLLQHGDGDGDVGEEREKLQKPLTNSLSPRQMKSLVALCDTIIPSIDNNVVRSSDESVANFYKTSASMAGTPEHVGKLISEKVKHPSRWLFLLTLWVLSTWFGTLILCGMASISSSFPFFHSYPEMSLLKRQRVMQSWSLSYLRPLKMFFRTIKLLTLLTFFTQVNEAEENPSWKAIGYCGPDPEFKAQLKNHFLHRTSKEEEHEKKDDDDDDDEEFRGPLHKGLVHLNYPRDMIKNSLRQFGFSVSTTSKKHDASNLSSPSLVIQCDAVVVGSGSGGGVVAGVLANAGYKVLVLEKGSYCARNNLSLLEGPSMDQMYLSNGLVATKDMSVLILAGSTVGGGSAVNWSASIKTPQHVCKEWCDRHELELFESKLYKEAMDAVCDKMGVQSEVEEEGFNNEVLRRGCLEMGYHVCNIPRNASSDHYCGWCCMGCKDGKKKSTSETWLVDLVKSGNGAIIPSCEAIQVLHKKKKGSERKIARGVAFAIEYKGKKDICVVESKVTIVACGALSTPALLKKSGLKNKNIGKNLHLHPVTMAWGYFPDSSSPKMWPEKHKKSYEGGIMTAMSTVVAQFDKTGYGAVIQTPSLHPGMFSILMPWTSGKDMKDRMHKFSRTAHVFALARDQGSGTVNSPSLISYQLKDVDKENLETGIEKVLRILAAAGAEEIGTHNNKGRSINVKQVSYHEFEKFVKEESSMSLTDLTTPLCSAHQMGSCKMGTNPSDSVVNQMGETWEMEDLYLADTSVFPTALGVNPMVTVQAIAYCTAQYVAEVLRRKRK 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00234 822 Gene3D - 736 821 IPR036188 -
Phco8g00234 822 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 69 821 - -
Phco8g00234 822 MobiDBLite consensus disorder prediction 242 263 - -
Phco8g00234 822 PIRSF Lg_Ch_AO 59 822 IPR012400 GO:0046577
Phco8g00234 822 SUPERFAMILY FAD/NAD(P)-binding domain 310 815 IPR036188 -
Phco8g00234 822 Gene3D - 297 629 IPR036188 -
Phco8g00234 822 Pfam GMC oxidoreductase 680 808 IPR007867 GO:0016614
Phco8g00234 822 MobiDBLite consensus disorder prediction 44 63 - -
Phco8g00234 822 Pfam GMC oxidoreductase 313 579 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00234 Phco-Chr8 2219489 2228309 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00234 8 2219489 2228309 Phco8g00234 8 2219489 2228309 ECH
Phco4g00698 4 5287877 5295735 Phco8g00234 8 2219489 2228309 PCT