Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00698 ATGGAGGAGAGAACCATAGGAAGAAATGGAAGCTCTAGAAAGGGTAGCTTGAGGTTTGGAATAGGAGTAGATGAAAAGAAGGATCACACTGTGGTAGAGCTTGGAAGTATTGACACACACAGACTTCTTCTCAGCGGAGGAGAGAGAGAAAAAAAGCAGCAACCTCCCACCAACTCTCTTTCTTTCCGGCAAATGAAATCCCTGTCTGCTCTCTGTGACACTATCTTACCTTCGGTCGACCACTTTCTTCACACTCCCGATGAATCTGTCAACAGGTTCTATCGGATTTCAGCCTCCATGGCAGGCACACCAGAACTTTTAGGAGGAATGATATGTGAGAAACTGAAACACCCAATGACAGGGTTACTGAAGGTGGTGTTATGGGCGTTGTCAACGTGGTTTGGAACATTAATATTGTGTGGGATGGGGTGTGTCTCAACCAAATTCCCCTTCATCCAGAGTTATCCTGATTTGTCTGTGGAGAAAAGGCAACAGATTATGCGATCATGGTCTCTTAGTTACATTCATCTCTTAAGACAGCTCTTCAGAACCATCAAACTTCTCACTCTCCTTATCTTCTTTACTCAGATAGATGAATCAGAAGACAACCTTACATGGAAAGCAATTGGATACTGTGGACCTGATCCAGAATTCAAAGCTCAGTTGAAGAACCACTTTTTAGAAGGAAAATCTAAGAGGGGAGAAGATGATAAGGAAGATGAAGATGTTGAAGAGGTGATAGGACCCCTCTACAAAGGTCTTGTCCATCTGAATAACCCACGAGACATCACTGCAGATGCTCTAAGACGGATTGGATTCCCCGTCTCTGTCATTCGTAGAAAGCATAAAGCTGCAGCAAACTTGTCTTCTCCTTCTTTGGTGATACAATGTGATGCTGTGGTGGTTGGTTCTGGCTCAGGGGGTGGAGTGATAGCTGGTGTCCTAGCAAAAGCTGGTTACAAAGTGTTGGTGTTGGAAAAGGGAGGGTATTTTGCTAGGAACAATCTTTCCCTTCTCGAAGGACAAACCATGGATCAAATGTACCTCAATGGTGGATTGGTTGCAAGTGATGACATGGGTATGTTCATACTATCAGGATCCACTGTTGGTGGAGGGTCAGCGATAAACTGGTCTGCCAGCATTAAAACCCCTCAGCATGTGCGCAAGGAATGGTGTGAGAAACATGGGCTAGAGTTGTTTGAAAGTGAATTGTATAGAGAAGCCTTGGATGCTGTCTGTGAGAAGATGGGAGTTCAATCTGAGATTGGAGATGAAGGATTCAACAATGCTGTCCTGAGAAAAGGGTGTCAAGAAATGGGGTATCCTGTCAATACAATTCCTAGGAATTCTTCATCAGATCATTATTGTGGCTGGTGCTGCCTGGGTTGTAAGGATGGGAGGAAGAAGGGTACCTCAGAAACATGGTTGGTGGACTTGGTGAAATCTGGAAATGGAGCAATTCTTCCAGGTTGTGAGGCAATAAAAGTCTTGCACAAGAAAAAGGAAGGGAAGGATAGAAAGGTTGCACGTGGAGTGGCTTTTGAATTTGAATATAAAGGGATTAAAGACATTTGTGTGGTGGAGTCCAAGGTCACAATTGTAGCATGTGGAGCACTCTGCACTCCAGCATTGCTTAAAAGAAGTGGCTTAAGGAATCAGAACATTGGGAGGCATTTACATCTTCATCCAGTGACAATGGCTTGGGGCTACTTCCCCGATGAACCTGCTTCTGAGGTGTGGCCAGAGGCATATAAGAAGAGCTATGAAGGAGGGATAATGACAGCAATGTCCTCGGTTGTTGCAGAGTTTGAACAGTCTGGATATGGTGCAGTGATCCAAACACCTTCATTGCATCCTGGTATGTTCTCAATTGTCACACCATGGACTTCTGGAATCGATATAAGAGATAGAATGCGAAAATTTTCTAGAACAGCTCATATATTTGCACTGGCAAGGGATAAAGGATCAGGGACTGTGGAATCACCAAAGCGTATCAGTTATAGATTGGCAGGTGTAGATGAAGAGAACTTGCAGAAAGGAATTGAAAAGGTGCTGAGAATTCTGGCGGCAGCTGGAGCTGAAGAAATTGGGACACATCATAATAAGGGAAGGACCTTAAACGTAAAGCAAGTGAGCTATCATGAATTTGAGAAATTTGTTAAGGAAGAAAGTTCAAGGCCACTGGCAGACCTTTCAACACCATTGTGCTCAGCACATCAGATGGGGAGTTGCAGGATGGGTTCTAATCCAAAGCAATCAGTGGTGAATCAGACAGGAGAAACATGGGAAACGGAAGGCCTTTATGTGGCTGATACAAGTGTCTTTCCCACAGCTTTGGGAGTGAATCCAATGGTCACTGTTCAAGCTACTGCTTATTGCATAGCACAATCTGTTGTAGAAGTTCTCAGAAGGAAAAGAAGTTAA 2424 0.4402 MEERTIGRNGSSRKGSLRFGIGVDEKKDHTVVELGSIDTHRLLLSGGEREKKQQPPTNSLSFRQMKSLSALCDTILPSVDHFLHTPDESVNRFYRISASMAGTPELLGGMICEKLKHPMTGLLKVVLWALSTWFGTLILCGMGCVSTKFPFIQSYPDLSVEKRQQIMRSWSLSYIHLLRQLFRTIKLLTLLIFFTQIDESEDNLTWKAIGYCGPDPEFKAQLKNHFLEGKSKRGEDDKEDEDVEEVIGPLYKGLVHLNNPRDITADALRRIGFPVSVIRRKHKAAANLSSPSLVIQCDAVVVGSGSGGGVIAGVLAKAGYKVLVLEKGGYFARNNLSLLEGQTMDQMYLNGGLVASDDMGMFILSGSTVGGGSAINWSASIKTPQHVRKEWCEKHGLELFESELYREALDAVCEKMGVQSEIGDEGFNNAVLRKGCQEMGYPVNTIPRNSSSDHYCGWCCLGCKDGRKKGTSETWLVDLVKSGNGAILPGCEAIKVLHKKKEGKDRKVARGVAFEFEYKGIKDICVVESKVTIVACGALCTPALLKRSGLRNQNIGRHLHLHPVTMAWGYFPDEPASEVWPEAYKKSYEGGIMTAMSSVVAEFEQSGYGAVIQTPSLHPGMFSIVTPWTSGIDIRDRMRKFSRTAHIFALARDKGSGTVESPKRISYRLAGVDEENLQKGIEKVLRILAAAGAEEIGTHHNKGRTLNVKQVSYHEFEKFVKEESSRPLADLSTPLCSAHQMGSCRMGSNPKQSVVNQTGETWETEGLYVADTSVFPTALGVNPMVTVQATAYCIAQSVVEVLRRKRS 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00698 807 SUPERFAMILY FAD/NAD(P)-binding domain 295 799 IPR036188 -
Phco4g00698 807 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 54 806 - -
Phco4g00698 807 Pfam GMC oxidoreductase 298 564 IPR000172 GO:0016614|GO:0050660
Phco4g00698 807 Pfam GMC oxidoreductase 664 793 IPR007867 GO:0016614
Phco4g00698 807 PIRSF Lg_Ch_AO 47 807 IPR012400 GO:0046577
Phco4g00698 807 Gene3D - 720 806 IPR036188 -
Phco4g00698 807 Gene3D - 282 603 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00698 Phco-Chr4 5287877 5295735 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00698 4 5287877 5295735 Phco4g00698 4 5287877 5295735 ECH
Phco4g00698 4 5287877 5295735 Phco8g00234 8 2219489 2228309 PCT