Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g03037 ATGGCACCTAATGCCACTTTCTTTCTCTCGGTCACATCTTCTTCCTTACCCTTTCCCTTATTCAACCAAAATCTCCATACCCAATTCGCATCTTCTCACAAACCATTCATTTCCTTATCCAAGGCTACGACTTTCTCCTTCTCCGCCTCGGCGGCCACGGTGGGTAAAGCAAGGGTCGTTCACCGACGAGAACATGCGGAGAAGGAAACGTTCAAGCAACCAAGACCAACCGAAGTCTACATCTGCAACCTTCCAAGAAGCTGTGACGTACAGCATCTACTTCACATGTTCAACCCCCATGGAACCGTACTCTCTGCTCAGGTTTCCCGGAGTGAGGAGACTGGTAAGAGTAGAGGGAGTGCTTATGTGACAATGGCATCTATTGACTCCGCTAAAAAAGCAATTGATGCATTGGACGCATCGGATGTTGGTGGGCGTGAAGTGCTGGTTAGATTTTCAGCTGAGATGAATCCCAAGAGGAGGGATCTTGACACAATGAATTCGTTACCCATGAGAACTATATACTATGAAGGTCCTCATAAGTTGTATGTTGGGAATCTTTCCAAGTTTACTATGCCTGAAGACCTGAGACAGCTTTTTGGCAGATTTGGTAATGTGACTAGTGTAAGGATGTTGCATGATATGAGACAAGGGAAACAAAGGGTCTATGCGTTTGTCTCCTATCTTTCAGAGAGAGAGCGTGATGCAGCAATGTCTCTCCATGGAACGGTGCTTTGTGGTCGAACACTGGTGATTAGAGAGCGTGTAAAGAGAGAGGAATAA 783 0.461 MAPNATFFLSVTSSSLPFPLFNQNLHTQFASSHKPFISLSKATTFSFSASAATVGKARVVHRREHAEKETFKQPRPTEVYICNLPRSCDVQHLLHMFNPHGTVLSAQVSRSEETGKSRGSAYVTMASIDSAKKAIDALDASDVGGREVLVRFSAEMNPKRRDLDTMNSLPMRTIYYEGPHKLYVGNLSKFTMPEDLRQLFGRFGNVTSVRMLHDMRQGKQRVYAFVSYLSERERDAAMSLHGTVLCGRTLVIRERVKREE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g03037 260 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 77 155 IPR000504 GO:0003723
Phco7g03037 260 SUPERFAMILY RNA-binding domain, RBD 175 258 IPR035979 GO:0003676
Phco7g03037 260 SMART rrm1_1 78 151 IPR000504 GO:0003723
Phco7g03037 260 SMART rrm1_1 181 253 IPR000504 GO:0003723
Phco7g03037 260 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 180 257 IPR000504 GO:0003723
Phco7g03037 260 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 79 148 IPR000504 GO:0003723
Phco7g03037 260 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 182 250 IPR000504 GO:0003723
Phco7g03037 260 PANTHER OS02G0815200 PROTEIN 28 254 - -
Phco7g03037 260 Gene3D - 48 165 IPR012677 -
Phco7g03037 260 Gene3D - 170 260 IPR012677 -
Phco7g03037 260 SUPERFAMILY RNA-binding domain, RBD 71 161 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g03037 Phco-Chr7 48969672 48970920 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00528 1 4266027 4269870 Phco7g03037 7 48969672 48970920 PCT