Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02954 ATGTTAAAGATGGTTGCGGAGGAGAAACCCCAAAAGACATACCCGACAACTGCTGAGGTAGTGGATGAGTTAAAGAGAATGGGGGACATAGGAGTTCCAATAGCAGCCATGAGCCTTGTGGGATACATCAAAAACATGGTCTTAGTTGTGTGCATGGGAAGGTTGGGAAGCCTTGAGTTAGCTGGTGGTGCTTTGGCCATAGGCTTCACCAACATAACTGGTTTCTCTGTGCTCTCAGGTTTAGCCATGGGAATGGAACCTCTTTGCACGCAAGCCTTTGGGTCAAGAAACTTCTGTTTGGTCTCTCTGACTTTACAAAGGACAATTTTCATGTTATTGGCAGCTTCACTACCCATTTGTCTATTGTGGCTGAAGCTTGAGCCTCTGATGCTATGGCTTCACCAGAACCCTGAGATAACCAGAGTCGCAAGCATCTATTGCCGGTTCTCCATCCCAGACCTCATTGCCAATAGTTTCCTTCACCCAATTCGAATCTATTTACGTAGCAAAGGGACAACTTGGCCTCTACTGTGGTGCACTTTACTTTCCATTCTGATACACATCCCTGTCGTGACTTTTTTGACCTTCAAACTCCACCTTGGTGTACCAGGGATTGCTATGTCAGCTTTTGTTGCCAACTTCAACACCCTTTTCTTCCTCCTATCATACATGCTCTACATGCGCGTCTCAAAGGGGTCACTTTCCATGCCTTTATTAATATCTCGCCCCTTGCCATCACGACAACAAGACCAAAACTTAACCAGAGTTATTAGTGCCCCAACAACAACAGCAACAACCTCACTAGGCAAAGAGTGGGGCATACTAATAAGGTTTTCCATTCAGAGTTGCTTAGGAGTGTGCTTGGAATGGTGGTGGTACGAGTTTATGACAATTCTAGCGGGTTACCTTTACAACCCGCGTGTTGCCTTAGCCACTGCTGGCATAGTAATTCAAACCACATCTCTTATGTACACTTTACCAACAGCACTGAGTGCTTCAGTGTCAACAAGAGTGGGGAATGAACTCGGGGCGGGTCAACCCGAGAGGGCAAGGTTGTCCACTATTGTGGCAATAGGAATGGCTCTTTCAAGTTCAATATTGGGGTTGTTATGGACCACATTAGGGAGAGAGAGATGGGGGAGGGTTTTCACTAGTGATAGTGAGGTGTTGGAACTTACCATGAGTGTTTTGCCCATAATTGGGGTTTGTGAGTTAGCAAATTGTCCTCAAACCACAAGCTGTGGAATCCTTAGGGGAAGTGCTAGGCCTGGTGTTGGGGCAGGGATAAATTTCTATTCATTTTACTTGGTGGGGGCACCAGTGGCTATAGTGATGTCATTTGTTTGGAGACTAGGGTTGGTGGGTCTTTGCTATGGGCTGTTGGCAGCACAGATAGCATGTGTGGTCTCTATTCTAGTTGTGGTATACAACACAGATTGGGAAAGGGAGTCATTGAAGGCAAAAAGCTTGGTGGGAAAGACCTCATGTGACACAATGGAACATGGAGACCAAACACTAGTCAAATGTGAAGAAGGTGTTGTCTTTCTCAATGAGAAGAACATCTCCCAAAAGTGA 1575 0.4584 MLKMVAEEKPQKTYPTTAEVVDELKRMGDIGVPIAAMSLVGYIKNMVLVVCMGRLGSLELAGGALAIGFTNITGFSVLSGLAMGMEPLCTQAFGSRNFCLVSLTLQRTIFMLLAASLPICLLWLKLEPLMLWLHQNPEITRVASIYCRFSIPDLIANSFLHPIRIYLRSKGTTWPLLWCTLLSILIHIPVVTFLTFKLHLGVPGIAMSAFVANFNTLFFLLSYMLYMRVSKGSLSMPLLISRPLPSRQQDQNLTRVISAPTTTATTSLGKEWGILIRFSIQSCLGVCLEWWWYEFMTILAGYLYNPRVALATAGIVIQTTSLMYTLPTALSASVSTRVGNELGAGQPERARLSTIVAIGMALSSSILGLLWTTLGRERWGRVFTSDSEVLELTMSVLPIIGVCELANCPQTTSCGILRGSARPGVGAGINFYSFYLVGAPVAIVMSFVWRLGLVGLCYGLLAAQIACVVSILVVVYNTDWERESLKAKSLVGKTSCDTMEHGDQTLVKCEEGVVFLNEKNISQK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02954 524 Pfam MatE 283 443 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco7g02954 524 Pfam MatE 33 190 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco7g02954 524 CDD MATE_eukaryotic 23 486 IPR045069 GO:0042910|GO:1990961
Phco7g02954 524 PANTHER MULTIDRUG RESISTANCE PROTEIN 18 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02954 Phco-Chr7 48366391 48368135 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02954 7 48366391 48368135 Phco7g02954 7 48366391 48368135 ECH
Phco8g02232 8 23997644 23999662 Phco7g02954 7 48366391 48368135 PCT