Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02800 ATGAGAGATCTGGATCCAGCTTTCCAGGGAGCTGGACAAAAGGCTGGACTTGAGATATGGCGTATTGAGAATTTTAATCCAGTTCCTGTTCCAAAGTCCTCTTATGGGAAATTTTTCACTGGAGACTCCTATGTGATCTTAAAGACAACAACATCAAAAAGTGGTGCTCTGCGCCATGACATCCATTACTGGCTTGGTAAAGACACTAGTCAGGATGAAGCTGGTGCTGCAGCCATCAAAACAGTTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGTGAAGTGCAAGGCCATGAAACTGAAAAGTTCCTGTCTTATTTCAAACCATGTATTATCCCTCAAGAAGGTGGAGTTGCTTCTGGTTTCAAACATCCTGAAGCTGAAAAGCATAAGACACGGTTGTTTGTATGCAGAGGAAAACATGTTGTACATGTCAAAGAGGTTCCATTTGCTAGAGCCTCACTGAATCATGATGATATTTTTGTTCTGGATACCGAATCAAAAGTTTTCCAATTTAATGGTTCCAATTCATCAATTCAAGAAAGGGCTAAAGCTTTGGAAGTTGTACAGTATATTAAGGATACCTATCATGATGGAAAATGTGAGGTAGCTGCTGTTGAGGATGGAAAGTTGATGGCTGATCCTGAAACTGGGGAATTCTGGGGTTTCTTTGGGGGATTTGCTCCTCTTCCAAGAAAAACAGCTGGTGATGATGATAAGGCTACCGATTCTCGCCCTCTGAAGCTGCTCTGTATTGAAAAGGGACAGGCTGAACCTGTGGAGGCTGATTCTTTGAAAAGGGAATTACTAGACACAAATAAATGCTATATTCTTGATTGTGGGTTTGAAGTGTTTGTTTGGATGGGTAGAAATACTTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGTTGCAGATGAGTTAGCCAGCGGCATTGATAAACTGAAACCCCAAATAATTCGTGTGATAGAAGGATTTGAAACAGTGATGTTCAGGTCCAAATTTGATTCTTGGCCACAGACAGCTGATGTAACAGTATCTGAAGATGGCCGCGGCAAGGTAGCGGCTCTTCTAAAACGCCAAGGAGTAAATGTGAAGGGTTTGTTGAAAGCTGATCCAGTGAGGGAAGAACCTCAACCCCACATTGATTGCACAGGGCATTTGCAGGTTTGGCGTGTGAAGGGCCAGGAAAAGATTATTCTTCAAGCTTCTGATCAGTCAAAATTTTATAGTGGAGATTGCTACATCTTTCAGTATACATATCCTGGAGAGGATAAAGAAGATTGTCTTATTGGAACGTGGATTGGAAAGAATAGTGTTGAGGAAGAACAAGCTTCAGCTAACTCATTAGCAAGCAAAATGGTTGAGTCAATGAAGTTTCTTGCTTGCCAGGCTCGTATATATGAAGGCAATGAACCAGTTCAATTTTATTCGATCCTCCAAAGCTTCATTGTTTTTAAGGGTGGGCTTGGTGAAGGATACAAGACTTACATTGCTGGAAAAGAAATTCCTGATGAGACATACGATGAGAATGGTGTTGCATTATTCCGCATCCAAGGCTCTGGACCAGATAATATGCAAGCTATACAAGTTGAACCAGTTGCGTCTTCCTTGAATTCCTCTTACTGTTACATACTTCATAATGGGCCAGCTGTCTTTACTTGGTCTGGAAACTCTACAACTGCAGAAGACCAGGAACTTGTTGAGAGGATGCTGGATTTGATAAAGCCAAATTTACAATCCAAACCACAGAGGGAAGGTTCCGAATCTGAACAGTTTTGGGATTTGTTAGGAGGAAAATCAGAATATCCCAGTCAAAAGATCCTTAGAGAGGCTGAAAGTGATCCTCACCTATTTTCTTGTCACTTTTCTAAAGGGAATTTAAAGGTGGCAGAGGTATACAATTTCGCCCAGGATGATTTGATGACAGAAGACATTTTCATCTTGGATTGTCATTTGGAAATCTTTGTCTGGGTTGGACAGCAGGTTGACTCCAAAAGTAGAATGCAGGCTCTAACAATTGGCGAGAAATTTCTTGAGCATGATTTTCTTCTAGAAAAATTATCTCGTGTAGCTCCAATATATGTTATCATGGAAGGGAGTGAGCCACCTTTTTTCACGCGCTTCTTTAAATGGGATTCTGCAAAATCTGCAATGCTGGGAAACTCATTTCAAAGGAAGCTTACGCTTGTGAAAAGTGGGGGTGCTCCACTTTTGGATAAACCCAAACGTAGAACACCGGTATCTTATGGGGGAAGGTCAAGTAGTGTGCCAGATAAATCCCAACGTTCATCCCGCAGCATGTCTGTCAGTCCTGATCGTGTTCGTGTAAGGGGCAGGTCTCCAGCCTTTAATGCTCTGGCAGCTACTTTCGAGAATCCTAATGCTAGGAACCTTTCAACCCCGCCTCCAGTAGTTAGAAAGCTCTATCCAAAATCTGTGACACCAGATTCTGCAATACTGGCACCAAAATCTGCTGCCATAGCTGCACTTAGTTCTTCTTTTGAACAGCCACCTTCAGCACGAGAAACTATGATACCTCGGTCAGTTAAAGTGAGTCCAGTTATGCCAAAATCAAACCCTGATAAAATTGACAAGGAGAATTCTGCGAGCACTAGAGTTGAATCTCTTACCATACAGGAAGATGTGAAAGAGAATGAAGTTGAAGATGAGGAAGGTCTTGTGATTTATCCATTTGAGCGCCTTAAAATAACAAGCACAGATCCTGTAACAAGTATTGATGTGACTAAGCGAGAGACTTATCTATCATCTGTGGAGTTCAAGGAGAAATTTGGGATGTCCAAGGATGCCTTTTACAAGTTGCCCAAATGGAAACAAAACAAACTCAAAATGGCCCTTCATTTAAGTTGCAGTGTGTCAGATCTCAAATCTCAAGGGTGCTGCTCTGTTTTGCAATGA 2925 0.4188 MRDLDPAFQGAGQKAGLEIWRIENFNPVPVPKSSYGKFFTGDSYVILKTTTSKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHPEAEKHKTRLFVCRGKHVVHVKEVPFARASLNHDDIFVLDTESKVFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAAVEDGKLMADPETGEFWGFFGGFAPLPRKTAGDDDKATDSRPLKLLCIEKGQAEPVEADSLKRELLDTNKCYILDCGFEVFVWMGRNTSLDERKSASGVADELASGIDKLKPQIIRVIEGFETVMFRSKFDSWPQTADVTVSEDGRGKVAALLKRQGVNVKGLLKADPVREEPQPHIDCTGHLQVWRVKGQEKIILQASDQSKFYSGDCYIFQYTYPGEDKEDCLIGTWIGKNSVEEEQASANSLASKMVESMKFLACQARIYEGNEPVQFYSILQSFIVFKGGLGEGYKTYIAGKEIPDETYDENGVALFRIQGSGPDNMQAIQVEPVASSLNSSYCYILHNGPAVFTWSGNSTTAEDQELVERMLDLIKPNLQSKPQREGSESEQFWDLLGGKSEYPSQKILREAESDPHLFSCHFSKGNLKVAEVYNFAQDDLMTEDIFILDCHLEIFVWVGQQVDSKSRMQALTIGEKFLEHDFLLEKLSRVAPIYVIMEGSEPPFFTRFFKWDSAKSAMLGNSFQRKLTLVKSGGAPLLDKPKRRTPVSYGGRSSSVPDKSQRSSRSMSVSPDRVRVRGRSPAFNALAATFENPNARNLSTPPPVVRKLYPKSVTPDSAILAPKSAAIAALSSSFEQPPSARETMIPRSVKVSPVMPKSNPDKIDKENSASTRVESLTIQEDVKENEVEDEEGLVIYPFERLKITSTDPVTSIDVTKRETYLSSVEFKEKFGMSKDAFYKLPKWKQNKLKMALHLSCSVSDLKSQGCCSVLQ 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02800 974 PRINTS Gelsolin family signature 640 662 IPR007122 GO:0051015
Phco7g02800 974 PRINTS Gelsolin family signature 407 423 IPR007122 GO:0051015
Phco7g02800 974 PRINTS Gelsolin family signature 319 340 IPR007122 GO:0051015
Phco7g02800 974 PRINTS Gelsolin family signature 528 548 IPR007122 GO:0051015
Phco7g02800 974 PRINTS Gelsolin family signature 588 607 IPR007122 GO:0051015
Phco7g02800 974 PRINTS Gelsolin family signature 669 688 IPR007122 GO:0051015
Phco7g02800 974 PRINTS Gelsolin family signature 432 450 IPR007122 GO:0051015
Phco7g02800 974 PRINTS Gelsolin family signature 465 485 IPR007122 GO:0051015
Phco7g02800 974 Gene3D Severin 129 243 IPR029006 -
Phco7g02800 974 MobiDBLite consensus disorder prediction 737 778 - -
Phco7g02800 974 Pfam Villin headpiece domain 923 957 IPR003128 GO:0003779|GO:0007010
Phco7g02800 974 ProSiteProfiles Headpiece (HP) domain profile. 893 958 IPR003128 GO:0003779|GO:0007010
Phco7g02800 974 SUPERFAMILY Actin depolymerizing proteins 591 713 - -
Phco7g02800 974 SUPERFAMILY Actin depolymerizing proteins 125 233 - -
Phco7g02800 974 SUPERFAMILY Actin depolymerizing proteins 5 143 - -
Phco7g02800 974 FunFam Gelsolin 516 608 - -
Phco7g02800 974 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 248 423 IPR036180 -
Phco7g02800 974 FunFam Villin-like 1 609 730 - -
Phco7g02800 974 FunFam Gelsolin 2 127 - -
Phco7g02800 974 CDD gelsolin_S4_like 384 481 - -
Phco7g02800 974 FunFam Villin-like 1 128 243 - -
Phco7g02800 974 SMART VILL_6 15 113 IPR007122 GO:0051015
Phco7g02800 974 SMART VILL_6 515 602 IPR007122 GO:0051015
Phco7g02800 974 SMART VILL_6 248 340 IPR007122 GO:0051015
Phco7g02800 974 SMART VILL_6 388 485 IPR007122 GO:0051015
Phco7g02800 974 SMART VILL_6 133 230 IPR007122 GO:0051015
Phco7g02800 974 SMART VILL_6 618 715 IPR007122 GO:0051015
Phco7g02800 974 SUPERFAMILY VHP, Villin headpiece domain 883 957 IPR036886 GO:0003779|GO:0007010
Phco7g02800 974 Gene3D Severin 384 496 IPR029006 -
Phco7g02800 974 PANTHER VILLIN 6 948 IPR007122 GO:0051015
Phco7g02800 974 SUPERFAMILY Actin depolymerizing proteins 507 609 - -
Phco7g02800 974 CDD gelsolin_S2_like 134 219 - -
Phco7g02800 974 MobiDBLite consensus disorder prediction 751 773 - -
Phco7g02800 974 CDD gelsolin_S5_like 513 604 - -
Phco7g02800 974 Gene3D Villin headpiece domain 896 957 IPR036886 GO:0003779|GO:0007010
Phco7g02800 974 Gene3D Severin 3 128 IPR029006 -
Phco7g02800 974 CDD gelsolin_S1_like 8 120 - -
Phco7g02800 974 Gene3D Severin 244 351 IPR029006 -
Phco7g02800 974 Gene3D Severin 610 729 IPR029006 -
Phco7g02800 974 SMART VHP_1 923 958 IPR003128 GO:0003779|GO:0007010
Phco7g02800 974 CDD gelsolin_S3_like 251 339 - -
Phco7g02800 974 Gene3D Severin 513 609 IPR029006 -
Phco7g02800 974 MobiDBLite consensus disorder prediction 854 877 - -
Phco7g02800 974 Pfam Gelsolin repeat 24 107 IPR007123 -
Phco7g02800 974 Pfam Gelsolin repeat 146 213 IPR007123 -
Phco7g02800 974 Pfam Gelsolin repeat 632 708 IPR007123 -
Phco7g02800 974 Pfam Gelsolin repeat 406 457 IPR007123 -
Phco7g02800 974 Pfam Gelsolin repeat 262 333 IPR007123 -
Phco7g02800 974 CDD gelsolin_S6_like 617 716 - -
Phco7g02800 974 FunFam Villin-4 381 515 - -
Phco7g02800 974 SUPERFAMILY Actin depolymerizing proteins 378 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02800 Phco-Chr7 47069186 47079776 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02800 7 47069186 47079776 Phco8g01819 8 19027690 19042446 PCT