Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02782 ATGTTGGGAATTTTGAGCAGCAACTATGGGATTGGCATTTTGAGGGTCATGCCACCGGCGCTGTCCGATCCGTTGTCAGCGACTGAGGCCACCTCCGACGCCGTTTTGAAGCGATCGGCGCCGGAGAATCGGCGATTCGGCGATCTTAGAGGGCTGCAGTGGCGGATAAATCTTGGGGTGTTGCCGTGTTCGACTTCGACTTCAATTGATGATTTTCGTCGAGTCACCGCTAATTGTAGAAGAAGGTATGCTAGCTTGAGAAGGCGCCTTCTGGTTGAACCACATGTTCCAAAGGATGGAACTAATTCACCCAATCTTGCCATTGACAATCCACTTTCACTAAATCCAGATAGTACATGGAGTCGCTTTTTCCGCAATGCAGAGCTGGAGAGAATGGTTGATCAGGATTTATCACGATTATACCCAGAACATGGCAGTTATTTTCAGGCATCAGGATGCCAAAGCATGTTGAGACGAATTTTGTTACTGTGGTGTCTAAGGCACCCAGAATGTGGTTATAGACAAGGAATGCATGAGTTACTTGCTCCTCTGCTTTATGTTCTGCAAGTTGATTTGGAGCGTCTCTCGGAAGTTCGGAAGCTTTATGAAGATCACTTTACAGACAGATTTGATGGCCTTTTAGGTCAAGAGAACGATCTTTCTTACAGCTTCGATTTTAAGAAGTCTCGAGAATTGATGGAGGATGGATTTGATTCCCATGGAAATTCCATTAAAGTCAATAGTCTTGATGAACTTGATCCTGAGATACAGACCATTGTATTATTAAGTGATGCTTATGGAGCTGAAGGTGAACTTGGCATTGTTTTATCTGAGAAATTCATGGAACATGATGCATACTGTATGTTTGAGGCTTTAATGAATGGGGCCCATGGTTCAGTTGCAATGGTTGATTTCTTCTCTTCTTCCCCTGTATCCGGGTCCCACAGTGGCCTTACGCCTGTGATTGAAGCTTCTACTGCATTGTATTATTTGTTGTCTCAAGTAGATTCATCTCTTCATAGCCATCTTTTTGATCTTGGGGTTGAACCCCAGTACTTTTCTCTTCGATGGCTGCGAGTTTTATTTGGACGAGAATTTTCACTTGCCAACCTCTTGATCATCTGGGATGAGATATTTGCATCAGAGAATAACATCAGTGGAAAAGGTTCTGATGACTGTGAGTTCAGGATCTTAACTTCACCCCGAGGAGCATTTATCTTAGCTATGGCAGTAGCAATGTTACTTCATTTAAGATCTTCACTGCTTGCAACTGAAAACCCTACAAGGTGTCTCCAGAGATTATTAAATTTCCCTGAAGACATTAATATCGAAAAACTACTACAGAAGGCCAGATCCTTGCAGGCTGTTGCTCTAAGTGTTGATATTTCATCCTCGTCACTTTTGCTTATGGGGTTCCATTACCAAAGTAAATCGATTTATAGTAGATCTGTGACCCTTCCATCTGAATCCTTGTCTCCGAAAACTCCTCTGAATTTGGTTCCTGATAGCTACTGGGAAGAAAAGTGGAGAGTTGCCCACAAGGCTGAAGAACACAGGCAAGATGGTCTAGAAAAACAAGTTCCCACTCGGAAAAAGGGGTGGACAGAAAAAGTAAAATTCAGTTTGAGAAGAGCAGAATCTGACCCTCCTAGGTCAAGGTTTCAGAGTGGCAAAAATTTTAGGCGCAATTTGTTGCAAGATCTACGCAAGGCACTTGGCTCAGAGGAAGATGCAGAGAAAATGAAGCCAGATGAAACCCTATGCCAGAATGATAATCCTTCTGAAGCAGTTGAAGTACAAGAAGACAGTAGCTCCAATGGTGACAACAATTACTCATCTGATGATAGATCTCCAGGTGTACATTCTGGCAGTGAGGAAGACTTGTCTATATATTCTGACCCAACTAGCCCCCCTAATGAGGCCAATGATCATGAAATAATCTCAGAGAAAAGTAGTCTTGCATCTGATTCATCCCTAGACGAACGTAATGAAACATCAGGTATTAGTTCGCCATTGCCAGTCTCCTGTCCTCTTGAGAACATTTCTCAGACATCGTTCAGCAATACAGGAAATTCTGAATGCAATGGAACTGCAGATACCAGTCCCAATGATCAACCCCTTCCAATCTCTGATCTTCCTGAGAACATTTCCCAGACATCAATCTGCAATACAGGAAATTCTGAATGTAATGAAACTTCAGATACCAGTCCCAATGATCCACCCCTTCCAATCTCTGATCCTCCTGAGAACATTTCTCAGACATCATTCCGCAATACAGGAAATTCTGAATTGAATGAAACTTCAGATACCAGTCCCAATGATCCACCCCTAACATCAGGGTGCAATACCAATGATGCTGAAAATAAAGTCACACCTCCTAAAGAGAAAAAGCATAATAAGTTGCAGTGGCTTTGGCCCTTTGGACGGAATACTGCTGAGGCTATATCTGAGAAAGCTGGTGCTGCCGAATCTACCAACCGTGGTAGCACTCAAAATAATGCTCCACAAGCCACCTCATCCACAACTAATGAGCATGGTTGTTCTGTTAGCTGCAGAGGAGAATCTGTCGACCAGAATGTTATGGGCACTTTGAAGAATATTGGGCAGTCTATGCTTGACCATATTCAGGTAATTGAATCTGTTTTCCAACAAGACCGCAAAGGGCAGGTTACTGCTGTGACAGCTCTCAAAGAGCTTCGGAAAATTAGCAATCTTTTGTCAGAGATGTGA 2730 0.4308 MLGILSSNYGIGILRVMPPALSDPLSATEATSDAVLKRSAPENRRFGDLRGLQWRINLGVLPCSTSTSIDDFRRVTANCRRRYASLRRRLLVEPHVPKDGTNSPNLAIDNPLSLNPDSTWSRFFRNAELERMVDQDLSRLYPEHGSYFQASGCQSMLRRILLLWCLRHPECGYRQGMHELLAPLLYVLQVDLERLSEVRKLYEDHFTDRFDGLLGQENDLSYSFDFKKSRELMEDGFDSHGNSIKVNSLDELDPEIQTIVLLSDAYGAEGELGIVLSEKFMEHDAYCMFEALMNGAHGSVAMVDFFSSSPVSGSHSGLTPVIEASTALYYLLSQVDSSLHSHLFDLGVEPQYFSLRWLRVLFGREFSLANLLIIWDEIFASENNISGKGSDDCEFRILTSPRGAFILAMAVAMLLHLRSSLLATENPTRCLQRLLNFPEDINIEKLLQKARSLQAVALSVDISSSSLLLMGFHYQSKSIYSRSVTLPSESLSPKTPLNLVPDSYWEEKWRVAHKAEEHRQDGLEKQVPTRKKGWTEKVKFSLRRAESDPPRSRFQSGKNFRRNLLQDLRKALGSEEDAEKMKPDETLCQNDNPSEAVEVQEDSSSNGDNNYSSDDRSPGVHSGSEEDLSIYSDPTSPPNEANDHEIISEKSSLASDSSLDERNETSGISSPLPVSCPLENISQTSFSNTGNSECNGTADTSPNDQPLPISDLPENISQTSICNTGNSECNETSDTSPNDPPLPISDPPENISQTSFRNTGNSELNETSDTSPNDPPLTSGCNTNDAENKVTPPKEKKHNKLQWLWPFGRNTAEAISEKAGAAESTNRGSTQNNAPQATSSTTNEHGCSVSCRGESVDQNVMGTLKNIGQSMLDHIQVIESVFQQDRKGQVTAVTALKELRKISNLLSEM 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02782 909 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 48 342 IPR035969 -
Phco7g02782 909 Gene3D - 321 460 - -
Phco7g02782 909 MobiDBLite consensus disorder prediction 748 788 - -
Phco7g02782 909 FunFam TBC1 domain family member 5 321 462 - -
Phco7g02782 909 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 319 454 IPR035969 -
Phco7g02782 909 MobiDBLite consensus disorder prediction 628 642 - -
Phco7g02782 909 MobiDBLite consensus disorder prediction 587 618 - -
Phco7g02782 909 MobiDBLite consensus disorder prediction 817 850 - -
Phco7g02782 909 SMART tbc_4 36 425 IPR000195 -
Phco7g02782 909 MobiDBLite consensus disorder prediction 651 739 - -
Phco7g02782 909 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 119 299 - -
Phco7g02782 909 MobiDBLite consensus disorder prediction 822 850 - -
Phco7g02782 909 MobiDBLite consensus disorder prediction 574 805 - -
Phco7g02782 909 Pfam Rab-GTPase-TBC domain 281 383 IPR000195 -
Phco7g02782 909 Pfam Rab-GTPase-TBC domain 130 189 IPR000195 -
Phco7g02782 909 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 44 450 - -
Phco7g02782 909 MobiDBLite consensus disorder prediction 541 560 - -
Phco7g02782 909 ProSiteProfiles TBC/rab GAP domain profile. 44 382 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02782 Phco-Chr7 46876443 46881511 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02782 7 46876443 46881511 Phco7g02782 7 46876443 46881511 ECH
Phco8g01834 8 19285659 19291047 Phco7g02782 7 46876443 46881511 PCT