Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02767 ATGCGCTCAGGAGCTTGTACATTGCAACAGACCCTCACAGCGGAGGCTGCTTCAGTGTTGAAGCACTCTCTTGGGTTGGCACGCAGAAGGGGCCATGCACAGGTCACCCCTCTGCATGTGGCTGCAACTTTGCTGAGCCTAAGAGCCAGTTCCTTGAGAAGGGCTTGTCTCAAATCTCAGCCACACCAAACATCACACCCTCTTCAGTGCAGAGCCCTTGAGCTTTGCTTCAATGTGGCCCTCAACAGGCTCCCAACAACACCTGGTCCCTTGCTCCACACACAGCCTTCTCTCTCCAATGCTCTCATTGCTGCACTCAAGAGAGCACAGGCTCACCAGAGAAGAGGCTGCATTGAGCAGCAGCAGCAGCAGCCACTTCTCACCATCAAGGTGGAGCTTGAACAGCTCATTATATCTATCCTTGATGACCCTAGCGTTAGCAGGGTTATGAGAGAGGCTGGTTTCTCTAGCACTGCTGTTAAGAGCAACATAGAGGACACTTCTTCAACACCTTCAGTTTTCCAGTGTTACAACAGTTCTGGTGGTGTTTTCTCTTCTCCTTGTTCTCCTGCTCCCAGTGAGAACAACACAGCCAGTTCCTTCAGGCAGAACCATTTCTTGGCTTCTTACACTTCTCCTGAGTTCAGTGCTCCACTTCTGTTCTCTCCACAGAAGAAGGCCTCGGTGTTTCCCATCACTGAGTCACCACCACCCTCTTCCAAGGAGGATATCAAGGTTGTTATTGATGTCCTCTTGAGGAAGAAGAAGAAGAACACTGTGATAGTAGGAGACTCAGTGGCACTCACTGAAGGCCTTGTGGGAGAGCTAATGGGGAAGTTGGAAAGAGGAGATGTGCCTGATGAGTTGAAGTCAACACATTTCATCAAGTTTCAGCTTGCACCGGTTTCTCTGAGGTTCATGAAAAGGGAAGAGGTGGAGATGAGTCTCTCAGCACTGAAGAGGAAGGTGGATTCTGTTGCATCAGGAGGAGGAGCCATTTTCTATGTTGGAGACCTCAAGTGGACTGTGGAAGCAATAACTTCTAGTGAAAAGGACGAAGGAGAAGTTTGTGGCTATAACCCAGTTGATCATCTACTTGCTGAAATAGGGAAGTTATTTTGTGATTCCAACACCAAGGTGTGGCTTATGGCCACAGCAAGTTATCAAACATACATGAGGTGCCAAATGAGGCAACCTCCTCTTGAGACTCAGTGGGCTCTTCAAGCTGTTCCTGTTCCATCAGGTGGACTTGGCTTGAGTCTCCATGCTTCCAGTGTTCACGATGCAAAGATGACAATCTCTCAGAATCCATCTTATATGCTGGAAACAAAGCTCTTCAGTAACAGCAAGGAGGAGCAGGATAAACTCAACTGCTGTGAAGAATGTGCCTCCAATTATGAAAAAGAAGCTCAGTTGTTCAAACCAGGCCAGAAGAAACTGTTGCCTTCCTGGCTTCAGTCTCATACCACCGAAGCCCATCAAAAGGATGAGTTGCTTCAGTTGAAAAGGAAATGGAACAGACTATGCCACTGTCTGCACCAGAGCAAACAGTCTGAAAACCATTGGAGCAACAGTTTACACGGCAATCAGAGTTCAAATGGGAAGATCTACCCTTACAATTCATCATACCCCTGGTGGCCAAACCAAGGCAGTGTCTTCACAGATTCAAGCTCAATATCTTTTGCTGATTCACCTGCCAAACCGGCTTATAGCTCCAACATTGTCCCTCGGTTTCGGCGCCAACAATCATGCACCATTGAGTTCAATTTCAGTGATGTGACTCAGAGAAAGCCATCCACAGCCTTGGATTCTCTCAAGGGCATGGAAGGTAATAATAACGAAGTAAAGATTACTCTTGGTCTTGGAAATTCAACATTCGGTGGTTCAGGGCAAACGGTGGAAAATATCATAACTACTGATAGAACACTGCGACGAGCTCATATTTGTAAACTGTTGCAGGAGAATGTGCCATGGCAATCTGAGACAGTTCCTTCCATAGCCGAGGCCTTGGTTGATTCCAAATCTGCAAAGCAAAGTGCCACTACTTGGTTGTTGTTGCAAGGAACTGACTCTATTGGGAAAACAAGGTTGGCACGTGCGATTGCAGAATCAGTGTTTGGCTCAGTCGATGTGCTCCTTCACTTGGACATGCTGAAAAATTCAGCGACCCCATTTGCTGAAAGGGTGGCTGGAGCATTGAAAAGCCATGAGAAGCTTGTGATTCTTATAGAAAATTTGGATTTTGCTGATGCCCAGTTCAGGAAGTTTCTTGCAGATGGGTTTGAAACTGGAAACTTTGGAAGTTTAAGTAGGAGTGAGGAGAGTTCAGGCCGAGCAGTGTTCATATTGACCAATGGTGACACCAGGGGCAATGAAGAGCAGAACAATAAGGAGTCAGTGATGAAGTTGGTGTTGCAGATAAGTGAAACCAAGCCTGATTTGGAGTCTTCATCATCACCTTGTTTGGGTCAGAAGAGAAGGGCTGAAGTGCTGGATTTGTTTTCCAAGGTTAAGAATCCAAGGGTGGAGGAGAAGGAGGAGGGTAGGAAAGTATTTTCTCGGCATTCAAGCTTCAACAATCTTGACCTGAACATGAAAGCTGATGAAGAGGATGACGGGGAAGAGAAAACAGGTGGAAGTAGTCCAATTTCAAGTGATTTGACAAGGGAAACTGTGGCGGATCCGTTGAGCTGGAATGGGGTTCTTGACTCAATTGAGAACAGGTTTGAGTTGAATGAAAGTCCAGAGAGGGAGAGGGAGGTGGAAGAGATGTTTCTGTCAAAGATGAAAGAGTCTTTTGAGGAGGTTTATGGGAAAGAATGTGTGGTGAAATTTACTGTAGAGAAGAGGGTGATAGATGAAATTGGTGTGGGGTGTGGAAATTTTACTAACAGCATGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGCAGTTTACAGACAGTTAACTTTGGTGGGGAAGAGGGGGGTATAGGTTTTACACTTTGTTGGGGTGGTAAAGGTGATAGGAAATGGGATAGTGGATTCATGGGTTCATGTTTGCCCAAGAATCTCAAAGTTAACTACTTCATGGATTGA 3078 0.4607 MRSGACTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSLRRACLKSQPHQTSHPLQCRALELCFNVALNRLPTTPGPLLHTQPSLSNALIAALKRAQAHQRRGCIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKSNIEDTSSTPSVFQCYNSSGGVFSSPCSPAPSENNTASSFRQNHFLASYTSPEFSAPLLFSPQKKASVFPITESPPPSSKEDIKVVIDVLLRKKKKNTVIVGDSVALTEGLVGELMGKLERGDVPDELKSTHFIKFQLAPVSLRFMKREEVEMSLSALKRKVDSVASGGGAIFYVGDLKWTVEAITSSEKDEGEVCGYNPVDHLLAEIGKLFCDSNTKVWLMATASYQTYMRCQMRQPPLETQWALQAVPVPSGGLGLSLHASSVHDAKMTISQNPSYMLETKLFSNSKEEQDKLNCCEECASNYEKEAQLFKPGQKKLLPSWLQSHTTEAHQKDELLQLKRKWNRLCHCLHQSKQSENHWSNSLHGNQSSNGKIYPYNSSYPWWPNQGSVFTDSSSISFADSPAKPAYSSNIVPRFRRQQSCTIEFNFSDVTQRKPSTALDSLKGMEGNNNEVKITLGLGNSTFGGSGQTVENIITTDRTLRRAHICKLLQENVPWQSETVPSIAEALVDSKSAKQSATTWLLLQGTDSIGKTRLARAIAESVFGSVDVLLHLDMLKNSATPFAERVAGALKSHEKLVILIENLDFADAQFRKFLADGFETGNFGSLSRSEESSGRAVFILTNGDTRGNEEQNNKESVMKLVLQISETKPDLESSSSPCLGQKRRAEVLDLFSKVKNPRVEEKEEGRKVFSRHSSFNNLDLNMKADEEDDGEEKTGGSSPISSDLTRETVADPLSWNGVLDSIENRFELNESPEREREVEEMFLSKMKESFEEVYGKECVVKFTVEKRVIDEIGVGCGNFTNSMFEKWLKDIFQSSLQTVNFGGEEGGIGFTLCWGGKGDRKWDSGFMGSCLPKNLKVNYFMD 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02767 1025 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Phco7g02767 1025 Pfam Clp amino terminal domain, pathogenicity island component 131 166 IPR004176 -
Phco7g02767 1025 Gene3D - 629 832 IPR027417 -
Phco7g02767 1025 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 988 - -
Phco7g02767 1025 SUPERFAMILY Double Clp-N motif 12 165 IPR036628 -
Phco7g02767 1025 MobiDBLite consensus disorder prediction 862 889 - -
Phco7g02767 1025 Gene3D - 9 170 IPR036628 -
Phco7g02767 1025 Gene3D - 234 414 IPR027417 -
Phco7g02767 1025 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 651 784 IPR027417 -
Phco7g02767 1025 FunFam protein SUPPRESSOR OF MAX2 1 9 170 - -
Phco7g02767 1025 ProSiteProfiles Clp repeat (R) domain profile. 8 170 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02767 Phco-Chr7 46725936 46730074 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02767 7 46725936 46730074 Phco7g02767 7 46725936 46730074 ECH
Phco8g01846 8 19425961 19434928 Phco7g02767 7 46725936 46730074 PCT