Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02762 ATGAGTAGTTTCCTGAACGGTGCTTCTCCGATGCGGCAAGCGGCGGAGAGTGATATCGAGGCTGGTCCCGCCACTCGCCTCCCCACTGACCTCGACAGCGGAGATTTATCCGATCCGTTTGATATTGCCAGAACTAAGAACGCTTCCATTGAACGCCTCAGGCGGTGGAGGCAAGCAGCGCTCGTGCTTAATGCTTCTCGTCGATTTCGTTATACCTTGGACTTGAAAAAAGAAGAAGAGAAGAAACAGATATTGAGAAAGATTAGGGCGCATGCACAAGCCATTAGAGCAGCTTATCTTTTCAAAGCAGCTGGTAGGGTGCCAGGAAATGAATCTATTAAACCTCCTCCTACCCCCATTGCTGGTGAATTTCCAATTGGACAAGAGCAACTTGCTTCAATTTCGAGGGAGCATGACATTACTGCCCTGCAACAATATGGAGGGGTTGTAGGACTATCAAATTTGTTGAAAACCAATTCAGAGAAGGGAATTCCTGGTGATGATGCTGATTTACTAAAACGTAGGAATTCATTTGGTTCCAACAATTATCCTCGGAAGAAAGGAAGAGGTTTTCTGATGTTTATGTGGGATGCTTGCAAGGACCTGACCTTGGTTATTTTAATGGTAGCTGCAGCAGCTTCACTGGCACTTGGGATAAAATCTGAGGGCATTAAGGAAGGATGGTACGATGGGGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTGTTGTTACAGCTATAAGTGATTATAAGCAGTCTCTTCAGTTTCGAGACCTAAATGAAGAGAAGAGAAATATACACCTGGAGGTTATTAGAGGTGGTAGAAGGGTTGAGATCTCTATATATGATATTGTTGTTGGGGATGTTATACCCCTAAATATTGGTAACCAGGTCCCTGCTGATGGAATTCTGATCACTGGTCACTCTCTTGCAATTGATGAATCAAGTATGACTGGGGAGAGCAAAATTGTCCATAAAGATTCTAAGGATCCTTTTCTGATGTCTGGATGTAAAGTTGCTGATGGCAGTGGCACAATGCTGGTTACTGGTGTTGGTACCAATACTGAATGGGGGCTTCTAATGGCTAGCATCTCAGAAGATACTGGCGAAGAAACACCATTGCAGGTTCGCTTAAATGGTGTAGCTACTTTCATTGGTATTGTTGGACTGTCTGTTGCTGTTGTTGTCCTGGTTGTGCTACTGGCTAGATATTTCTCCGGGCATACTGAAAACGACGATGGTTCGCCTCAATTTAAAGCTGGCAAGACTAAAGTTGGTGATGCTGTTGATGGTGCAATTAAGATAGTAACTGTTGCGGTCACGATTGTCGTGGTTGCAGTTCCTGAGGGGCTCCCATTAGCAGTTACTTTAACGCTGGCCTACTCGATGAGAAAAATGATGGCAGATAAAGCTTTGGTAAGGAGGCTTTCTGCCTGTGAGACCATGGGCTCTGCCACAACCATATGTAGTGATAAGACTGGCACATTGACTACGAATGAGATGACTGTGGTTGAGGCTTATGCTGGGGGTAAGAAAATTGATCCTCCTCACAAGTTGGAGAATCCTATGCTTCGCTCCCTGCTCATTGAGGGTGTTGCACTGAACACTAACGGTAGTGTATATGCTCCTGAGGGTGCTAATGGTGTTGAAGTTTCTGGATCACCAACAGAAAAGGCAATTTTACATTGGGGAATACAGCTTGGGATGAATTTTACGGCTGCTAGATCTGAATCATCAATTATTCATGTTTTCCCATTCAATTCAGAGAAAAAAAGAGGAGGTGTTGCATTACAAACGGCGGATTCTAACATCCATATACACTGGAAAGGTGCGGCCGAGATAGTCCTAGCCTGCTGTACAGGCTATATTGATGCAAATGACCAGCTGGTGGGGATGGATGAGGAGAAGATGTCATTTTTCAAAAAGGCTATTGAAGACATGGCTGCTGATAGTCTACGTTGTGTTGCCATTGCATATAGAACATATGAAAAGAAAAAGGTTCCAACTAATGAAGAACTACTTGCTCACTGGTCTTTACCAGAGGATGATCTTAATTTACTGGCTATTGTTGGTATTAAGGATCCTTGTCGACCTGGTGTCAAAGATGCAGTGCTACTTTGTCAAAAAGCTGGGGTTAAGGTGAAAATGGTCACTGGTGACAATGTGAAAACTGCAAAAGCAATTGCTGTGGAATGTGGAATACTTGGTTCATTTGCTGATGCTACAGAACCAAATATCATTGAAGGAAAAACATTTCGTGGCATGTCAGAAGCACAGAGAGATGAAATTGCTGATAGGATATCGGTAATGGGACGGTCATCTCCCAATGACAAATTATTGCTAGTACAAGCATTGAGGAGGAAGGGTCATGTTGTTGCTGTAACTGGTGATGGAACAAATGATGCTCCTGCCCTTCATGAGGCCGATATAGGTCTTGCAATGGGTATCCAAGGTACAGAAGTTGCCAAAGAGAGCTCTGATATCATTATTTTGGATGACAATTTTGCTTCAGTTGTAAAGGTTGTCAGATGGGGACGATCTGTCTATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTGGCCGCGTTAGTGATAAATGTTGTTGCTGCAATTTCTACTGGTGATGTTCCATTGAATGCTGTGCAGCTTCTTTGGGTAAATCTAATCATGGACACTCTGGGAGCACTAGCCCTGGCAACCGAACCACCAACTGATCACCTAATGGATCGATCTCCAGTTGGTCGAAGAGAGCCTCTCATAACAAATATTATGTGGAGGAATTTGCTGATACAGGCAATGTACCAAGTCTCTGTCTTGCTTGTACTCAATTTCCGAGGTAGAAGCATACTGGGTTTGAGCCAAGACAACAATCAGCATGCAATCAAAGTGAAGAACACTTTGATATTTAACGCATTTGTTCTCTGTCAAATATTTAATGAATTTAATGCTCGAAAGCCAGATGAATACAACATCTTTAAAGGAGTGACGAGAAACTACCTCTTTATGGGTATAATTGGATTAACTCTTGTGCTTCAGATTGTCATCATTGAATTTCTGGGCAAGTTTACAAAAACAGTGAGGTTAAATTGGAAGCAGTGGATCATCTGTGTCATTATTGGATTCATTAGTTGGCCTCTTGCTGTGATTGGGAAATTGATACCAGTGCCAACTACTCCTATCAATAACGTTTTTTCGAATTGTGGAACTTCTAGAAGGAAGGAGCCCGAGGAATCTTAA 3249 0.4269 MSSFLNGASPMRQAAESDIEAGPATRLPTDLDSGDLSDPFDIARTKNASIERLRRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRAAYLFKAAGRVPGNESIKPPPTPIAGEFPIGQEQLASISREHDITALQQYGGVVGLSNLLKTNSEKGIPGDDADLLKRRNSFGSNNYPRKKGRGFLMFMWDACKDLTLVILMVAAAASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIHLEVIRGGRRVEISIYDIVVGDVIPLNIGNQVPADGILITGHSLAIDESSMTGESKIVHKDSKDPFLMSGCKVADGSGTMLVTGVGTNTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVVVLVVLLARYFSGHTENDDGSPQFKAGKTKVGDAVDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTTNEMTVVEAYAGGKKIDPPHKLENPMLRSLLIEGVALNTNGSVYAPEGANGVEVSGSPTEKAILHWGIQLGMNFTAARSESSIIHVFPFNSEKKRGGVALQTADSNIHIHWKGAAEIVLACCTGYIDANDQLVGMDEEKMSFFKKAIEDMAADSLRCVAIAYRTYEKKKVPTNEELLAHWSLPEDDLNLLAIVGIKDPCRPGVKDAVLLCQKAGVKVKMVTGDNVKTAKAIAVECGILGSFADATEPNIIEGKTFRGMSEAQRDEIADRISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISTGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFRGRSILGLSQDNNQHAIKVKNTLIFNAFVLCQIFNEFNARKPDEYNIFKGVTRNYLFMGIIGLTLVLQIVIIEFLGKFTKTVRLNWKQWIICVIIGFISWPLAVIGKLIPVPTTPINNVFSNCGTSRRKEPEES 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02762 1082 NCBIfam HAD-IC family P-type ATPase 430 513 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phco7g02762 1082 NCBIfam HAD-IC family P-type ATPase 762 875 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phco7g02762 1082 Gene3D - 499 695 IPR023299 GO:0000166
Phco7g02762 1082 NCBIfam calcium-translocating P-type ATPase, PMCA-type 138 1059 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Phco7g02762 1082 FunFam Calcium-transporting ATPase 9 plasma membrane-type 343 513 - -
Phco7g02762 1082 FunFam Calcium-transporting ATPase 244 365 - -
Phco7g02762 1082 Pfam Cation transporting ATPase, C-terminus 880 1057 IPR006068 -
Phco7g02762 1082 Pfam E1-E2 ATPase 267 467 - -
Phco7g02762 1082 SFLD Haloacid Dehalogenase 471 847 - -
Phco7g02762 1082 PRINTS P-type cation-transporting ATPase superfamily signature 819 831 - -
Phco7g02762 1082 PRINTS P-type cation-transporting ATPase superfamily signature 795 814 - -
Phco7g02762 1082 PRINTS P-type cation-transporting ATPase superfamily signature 489 503 - -
Phco7g02762 1082 PRINTS P-type cation-transporting ATPase superfamily signature 688 699 - -
Phco7g02762 1082 PRINTS P-type cation-transporting ATPase superfamily signature 313 327 - -
Phco7g02762 1082 PRINTS P-type cation-transporting ATPase superfamily signature 710 720 - -
Phco7g02762 1082 Gene3D - 486 840 IPR023214 -
Phco7g02762 1082 FunFam Calcium-transporting ATPase 499 695 - -
Phco7g02762 1082 ProSitePatterns E1-E2 ATPases phosphorylation site. 491 497 IPR018303 -
Phco7g02762 1082 Gene3D - 197 1049 - -
Phco7g02762 1082 FunFam Calcium-transporting ATPase 48 104 - -
Phco7g02762 1082 SUPERFAMILY Calcium ATPase, transmembrane domain M 148 1059 IPR023298 -
Phco7g02762 1082 PRINTS Sodium/potassium-transporting ATPase signature 482 503 - -
Phco7g02762 1082 PRINTS Sodium/potassium-transporting ATPase signature 232 252 - -
Phco7g02762 1082 PRINTS Sodium/potassium-transporting ATPase signature 606 624 - -
Phco7g02762 1082 Gene3D - 170 365 - -
Phco7g02762 1082 FunFam Calcium-transporting ATPase 689 840 - -
Phco7g02762 1082 SUPERFAMILY HAD-like 487 900 IPR036412 -
Phco7g02762 1082 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 495 700 IPR023299 GO:0000166
Phco7g02762 1082 CDD P-type_ATPase_Ca_PMCA-like 171 928 - -
Phco7g02762 1082 PANTHER CATION TRANSPORTING ATPASE 97 1059 - -
Phco7g02762 1082 SFLD p-type atpase 471 847 IPR044492 -
Phco7g02762 1082 Pfam Ca2+-ATPase N terminal autoinhibitory domain 36 80 IPR024750 GO:0005516
Phco7g02762 1082 Gene3D - 48 103 - -
Phco7g02762 1082 Pfam haloacid dehalogenase-like hydrolase 486 809 - -
Phco7g02762 1082 Pfam Cation transporter/ATPase, N-terminus 147 214 IPR004014 -
Phco7g02762 1082 FunFam Calcium-transporting ATPase 812 1061 - -
Phco7g02762 1082 FunFam Calcium-transporting ATPase 197 254 - -
Phco7g02762 1082 SUPERFAMILY Calcium ATPase, transduction domain A 267 362 IPR008250 -
Phco7g02762 1082 SMART Cation_ATPase_N_a_2 145 219 IPR004014 -
Phco7g02762 1082 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02762 Phco-Chr7 46620162 46642275 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02762 7 46620162 46642275 Phco7g02762 7 46620162 46642275 ECH
Phco8g01852 8 19565731 19585318 Phco7g02762 7 46620162 46642275 PCT