Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02761 ATGTACCATTTGCAACAGCTTCATAATCATCAACCACCTATGATGATGAAGATGGATTCTATGAGGAAGAGGGAGAGAAACAAAGCCATGGAGAAAGAGAGGCTTCAAGTCATGGACTTGAGTGGCATGGCTTTGGACTCTCTTCCCAAGCCTTCTCTTGATTTAGCCACCATTTCCAAGTTGGACTTATCTAATAACAATCTCCAGGACATTCCTGAATCCTTAACTGCGAGACTACTGAATATGGAGGTGTTGGATGTTCGCTCCAACCAGCTGAAGTCTCTTCCCAATTCCATTGGTTGTCTCTCTAAGCTTAAGGTTTTAAATGTCTCCGGCAACTTCATCGAATTCCTCCCCAAAACCATTGAGAATTGCAGAGCATTAGAAGAACTGAATGCAAACTTCAACAAGCTGAGCAAGTTACCAGACACAATAGGGTTTGAGCTGATAAACCTGAAGAAGCTGTCAGTGAACTCCAACAAGCTGGTTTTTCTTCCGAGCTCCACCTCACACCTGACATCTTTGAAGGTTCTGGATGCACGCTTGAATTGCCTAAGGGAACTTCCGGAGGACCTTGAGAACCTCGTCAACCTTGAGACACTGAATGTGAGCCAGAACTTCCAGTACTTGGAAACCCTCCCTTATTCCATAGGACTCCTCTTGTCCCTGGTTGAACTTGACGTTAGCTACAACAAGATCAAGACCTTGCCTGAGTCCATTGGGTGCCTCAAGAACCTCAAGAAGCTAAGTGTTGAAGGGAACCCTCTAGTTTGTCCCTCAATGGAGGTGGTGGAGCAGGGACTGCACGTGGTGATGGAGTACATGCAACATAAAATGAACTCAAGTGATCAACGCCCAACAAAGAAAAGGTGGTGGATGATGAAGATGGTGAAGTGTGGAACCTTCAATAAACAAGTTAGAGGTGGGAAACGAGCAGAAGGTTACAACATGCTTAAGCACCAGAATATCAATGGTCTTGCTTCCCCAGGCTTCATGGGGATGCTTTCACCCCTTCGCTTCTTCTCATCACCCCGCAATTCCTTCAGCTGA 1050 0.4571 MYHLQQLHNHQPPMMMKMDSMRKRERNKAMEKERLQVMDLSGMALDSLPKPSLDLATISKLDLSNNNLQDIPESLTARLLNMEVLDVRSNQLKSLPNSIGCLSKLKVLNVSGNFIEFLPKTIENCRALEELNANFNKLSKLPDTIGFELINLKKLSVNSNKLVFLPSSTSHLTSLKVLDARLNCLRELPEDLENLVNLETLNVSQNFQYLETLPYSIGLLLSLVELDVSYNKIKTLPESIGCLKNLKKLSVEGNPLVCPSMEVVEQGLHVVMEYMQHKMNSSDQRPTKKRWWMMKMVKCGTFNKQVRGGKRAEGYNMLKHQNINGLASPGFMGMLSPLRFFSSPRNSFS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02761 349 SMART LRR_sd22_2 243 266 - -
Phco7g02761 349 SMART LRR_sd22_2 172 194 - -
Phco7g02761 349 SMART LRR_sd22_2 220 242 - -
Phco7g02761 349 SMART LRR_sd22_2 79 100 - -
Phco7g02761 349 SMART LRR_sd22_2 102 127 - -
Phco7g02761 349 Gene3D Ribonuclease Inhibitor 146 306 IPR032675 -
Phco7g02761 349 Gene3D Ribonuclease Inhibitor 2 145 IPR032675 -
Phco7g02761 349 ProSiteProfiles Leucine-rich repeat profile. 222 243 IPR001611 GO:0005515
Phco7g02761 349 SUPERFAMILY L domain-like 34 258 - -
Phco7g02761 349 ProSiteProfiles Leucine-rich repeat profile. 57 78 IPR001611 GO:0005515
Phco7g02761 349 ProSiteProfiles Leucine-rich repeat profile. 81 102 IPR001611 GO:0005515
Phco7g02761 349 SMART LRR_bac_2 220 239 - -
Phco7g02761 349 SMART LRR_bac_2 79 98 - -
Phco7g02761 349 SMART LRR_bac_2 55 74 - -
Phco7g02761 349 SMART LRR_bac_2 125 144 - -
Phco7g02761 349 SMART LRR_bac_2 243 261 - -
Phco7g02761 349 SMART LRR_bac_2 195 216 - -
Phco7g02761 349 SMART LRR_bac_2 102 121 - -
Phco7g02761 349 SMART LRR_bac_2 172 191 - -
Phco7g02761 349 SMART LRR_bac_2 149 168 - -
Phco7g02761 349 Pfam Leucine rich repeat 151 206 IPR001611 GO:0005515
Phco7g02761 349 Pfam Leucine rich repeat 58 113 IPR001611 GO:0005515
Phco7g02761 349 PANTHER LEUCINE-RICH REPEAT-CONTAINING 34 146 - -
Phco7g02761 349 SMART LRR_typ_2 126 148 IPR003591 -
Phco7g02761 349 SMART LRR_typ_2 149 171 IPR003591 -
Phco7g02761 349 SMART LRR_typ_2 55 78 IPR003591 -
Phco7g02761 349 SMART LRR_typ_2 220 243 IPR003591 -
Phco7g02761 349 SMART LRR_typ_2 79 101 IPR003591 -
Phco7g02761 349 SMART LRR_typ_2 172 195 IPR003591 -
Phco7g02761 349 SMART LRR_typ_2 102 125 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02761 Phco-Chr7 46606376 46609450 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02761 7 46606376 46609450 Phco7g02761 7 46606376 46609450 ECH
Phco8g01856 8 19616681 19620172 Phco7g02761 7 46606376 46609450 PCT