Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02701 ATGGGTGATGTTCTAAGCCCTTTCACAGTCTCATCCCCTCCTCCACCCTCTTCCTCTTCCAAGAACAACAGCATGCCCATGTTGTACTACGGTCTTGTGGTGGTGGGAACCGCCGCCATAGTGCTGGCCATATACAACCTCGTTCTCCTGAAACGCGGCCACGCGCGGTCGCAGCCTTCTGGGGCGAGTTCCAATGGTTTGGGAACAACAATTGAAGGGGTTTCGGAGATAACGAGGAGGTTGGAGAGTCAACAAAGACACTTGCTTTCGAGCTTCAAGTACAAGAAAGAAGAGGTGGGAAAAGAAAAAGAAGAAGAGTTGGAAGATTTTGAATGCCCCGTTTGCTTATCGGTTTATGAAGAAGGAGAAGAAGTGAGGAAGCTTCCACAGTGCAAACACTACTTCCACGTTCTTTGCATAGACATGTGGCTCTTCTCTCACTTCGATTGCCCCATTTGCAGAACACCCGTTATCGACAACATTGAATCCGGTCGCATCTCATAG 504 0.4901 MGDVLSPFTVSSPPPPSSSSKNNSMPMLYYGLVVVGTAAIVLAIYNLVLLKRGHARSQPSGASSNGLGTTIEGVSEITRRLESQQRHLLSSFKYKKEEVGKEKEEELEDFECPVCLSVYEEGEEVRKLPQCKHYFHVLCIDMWLFSHFDCPICRTPVIDNIESGRIS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02701 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 159 IPR013083 -
Phco7g02701 167 CDD RING-H2_EL5-like 112 154 - -
Phco7g02701 167 SUPERFAMILY RING/U-box 101 159 - -
Phco7g02701 167 ProSiteProfiles Zinc finger RING-type profile. 112 154 IPR001841 -
Phco7g02701 167 MobiDBLite consensus disorder prediction 1 22 - -
Phco7g02701 167 FunFam RING-H2 finger protein ATL1 69 159 - -
Phco7g02701 167 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 18 157 IPR044675 -
Phco7g02701 167 SMART ring_2 112 153 IPR001841 -
Phco7g02701 167 Pfam Ring finger domain 111 154 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02701 Phco-Chr7 45983907 45984410 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01927 8 20404158 20404670 Phco7g02701 7 45983907 45984410 PCT