Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02529 ATGGGTTCTCGGATTCAGCTTCTGGGTCTCTGCTTATGGTTTCACTTTGCATGCTTCAGCTTCATTTTTGGTTCCAGGGTGGCTGTAGGAGGAGATGCTACTGTGAAAGGGACTGTTGCCATTGATGACAAAGCTGTGATTGGAACTACTGATGGTGATTTTGTGTGTGCAACTTTGGATTGGTGGCCTCCTGAGAAATGTGACTATGGGAGATGCAGTTGGGGTCTTGCTTCTCTTCTCAATCTGGATCTCAACAACAAAAATTTTCTAAATGCTGTGAAAGCCTTTTCACCTTTGAAACTCAGATTAGGTGGAAGTTTGCAAGACAAGTTAACATATGGGACTGATGATTACCACCAACCTTGTACTCCTTTTGTTAAGAAAGATTCTGAGATGTTTGGTTTCACGCAAGGGTGCCTCCCAGTTAAAAGATGGGATGAACTTCACTACTTTTTTGAAAAAGCAGGGGCTAAGATCATTTTTGGATTAAATGCTCTTGCTGGAAAATCAATTCATGGTGGTTCTGCAACAGGACCTTGGAATTCCACCAATGCTGAGTCCTTTATTAGATACAATGTTAGAAATGGCTACACCATTTATGGATGGGAACTTGGCAATGAATTGAGTGGGAGTGGAGTGGGAACAAGCATTACAGCAGACCAATATGTTTCTGATTTTGCTACTTTACGAGATGTAGTTTACAATGCATATAGAGAGATTGATTCTAAGCCACTAGTCATTGCACCTGGAGGGTTCTTTGATGCAACCTGGTTTAGGGAATTTATAAGCAAATCTGGAAAAGCTTTGGATGTGGTCACCCACCACATTTATAACCTTGGACCAGGAGTTGATGAACACCTTGTGGAAAAAATTCTGGACCCTTCCTTTCTTGATAAGGAGGCTAGCACATTCAGTGGCCTCAAAAATATACTTGCAAGTACAGTTACCTCAGCTACAGCATGGGTTGGTGAGTCAGGAGGTGCCTACAATAGTGGTCGTCATCTTGTATCTGATGCATTTGTTTATAGTTTCTGGTATTTGGATCAGCTTGGCATGTCAGCTGCTTATAACACTAAAACATATTGCAGACAGAGTTTGATAGGAGGAAACTATGGTTTACTAAATACTACCAATTTCCTGCCAAATCCAGACTACTATAGTGCTCTTCTTTGGCATCGACTCATGGGAAGACATGTACTGTCAACTACCTTCTCTGGGACAAAAATGATAAGAGCTTATGCACACTGTGCAAAGCAATCCAGGGGAATCACAGTACTGTTGATCAACCTAGACGGCAACACAAGTGTTGAAGCTGATATAACCTTCGACAACAATGCAAAGAGTTTGAGGCTGAGAAAGATGTCTAGTCATTCAAACATGATGGAATTACCTCTTGCAAGTGAAACTGCAAGAGAAGAGTACCATCTAACTCCACAGGATGGGAATATACATAGCCAAATCATGGTACTAAATGGAAAACCTCTAAGGGTAAACTCTGCTGGTGACATTCCTCCTTTGGATCCTATATATGTGAACTCATCAGAGCCAATAAACGTTGCTCCTTTCTCTATTGTATTTGCCCATTTACCTGATGTTGTTGTTACAGCTTGCGGCTAG 1617 0.4143 MGSRIQLLGLCLWFHFACFSFIFGSRVAVGGDATVKGTVAIDDKAVIGTTDGDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKNFLNAVKAFSPLKLRLGGSLQDKLTYGTDDYHQPCTPFVKKDSEMFGFTQGCLPVKRWDELHYFFEKAGAKIIFGLNALAGKSIHGGSATGPWNSTNAESFIRYNVRNGYTIYGWELGNELSGSGVGTSITADQYVSDFATLRDVVYNAYREIDSKPLVIAPGGFFDATWFREFISKSGKALDVVTHHIYNLGPGVDEHLVEKILDPSFLDKEASTFSGLKNILASTVTSATAWVGESGGAYNSGRHLVSDAFVYSFWYLDQLGMSAAYNTKTYCRQSLIGGNYGLLNTTNFLPNPDYYSALLWHRLMGRHVLSTTFSGTKMIRAYAHCAKQSRGITVLLINLDGNTSVEADITFDNNAKSLRLRKMSSHSNMMELPLASETAREEYHLTPQDGNIHSQIMVLNGKPLRVNSAGDIPPLDPIYVNSSEPINVAPFSIVFAHLPDVVVTACG 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02529 538 Gene3D Glycosidases 73 393 - -
Phco7g02529 538 PANTHER HEPARANASE-RELATED 33 537 - -
Phco7g02529 538 FunFam heparanase-like protein 3 74 393 - -
Phco7g02529 538 SUPERFAMILY (Trans)glycosidases 51 395 IPR017853 -
Phco7g02529 538 Pfam Glycosyl hydrolase family 79, N-terminal domain 37 351 IPR005199 GO:0016020|GO:0016798
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02529 Phco-Chr7 44106932 44110598 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02529 7 44106932 44110598 Phco7g02529 7 44106932 44110598 ECH
Phco8g01186 8 12480064 12482927 Phco7g02529 7 44106932 44110598 PCT