Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02447 ATGGAAGCTAGTACTGGACTTTTTGCAGGTACTCCAAACAGCAAAGAGCTTGTGGCCATTCAAGGACCCGATGAGCCTAAGCCGGTGAAGAACTTAGATGGTCAGCTCTGTGAGATATGTGGTGATTCTGTGGGACTTACCGTGGAAGGAGACTTATTTGTAGCTTGTGAAGAGTGTGGTTTCCCAGTGTGCAGGCCATGCTATGAGTATGAGAGAAGGGAAGGGACTCAAGTTTGTCCTCAGTGTCATACAAGATACAAGCGCATCAAAGGAAGTCCAAGAGTGGAGGGAGATGAGGATGAAGACGATGTGGATGATATTGAACATGAATTCAAGAATGAACAGGTGCAGAAAGGACACATGATTCATGGAGATGATAATGGGAGTTCTAAATCAGGTTTAGCAAAGGTGAATGGAGAGCTGCTTTCTACTAGTGTGGGAGAACCTGGTGCAAAGTTGGATGAAAAGGAGAAAATAGATGAGTGGATCTTGCGCCAAGGGAATCTATGGCCTGAAACTGATTCCTCAGTTGATCATGAAAAGGCCATGAAAGAGCCATTGTCAAGGAAAGTAGCAATACCATCAGGCAAACTCAGTCCTTACAGAATGATGGTTGTGGCTAGATTCCTCCTTCTATTACTCTTCTTTCAGTACAGAATATTCCACCCTGTACCTGATGCAGTTGGACTATGGTTCATATCTGTAACGTGTGAAATCTGGCTTGCATTATCCTGGATGATTGATCAGATTCCCAAATGGTTTCCCATTGATCGCGAGACATATCTTGATCGTCTTTCAATCAGGTTTGAACAAGAGAACAAGCCAAATATGCTTTCTCCCATAGATATCATTGTCACTACTGTGGATCCAATCAAGGAACCTCCTCTTGTGACAGCCAACACTGTTCTTTCAATCTTGGCCCTGGATTACCCTGCTGACAAAATCTCATGCTATGTTTCTGACGATGGAGCTTCCATGCTCACCTTTGAAGCTCTTCAAGAAACTGCTGAGTTTTCTAGAAAGTGGGTACCTTTCTGCAAGAAGTTCTCTATAGAACCTAGAGCACCAGAAAAGTACTTCTCTGAGAAAATAGATTTTCTAAAGGATAAGCTTCAATCCACTTACGTAAAAGAACGCCGTACTATGAAGAGAGAATACGAAGAATTTAAGGTGAGAATAAATGCACTAGTGGCTAAATCTATGCGAGTTCCCCCAGAAGGGTGGACTATGAAAGATGAGACACCATGGCCAGGAAACAACCCCAAAGATCATCCAAGTATGATACAGGTCCTTCTTCCTCACAATGTAGGTAATGAACTTCCTTGTCTTGTCTACACATCTCGTGAGAAAAGGCCTGCATTTCAGCACCACGGCAAAGCTGGCGCAATCAACGCCTTGCTTCGAGTATCAGCAGTGTTAAGCAATGCTCCTTTTGTGCTCAACTTGGATTGCAATCACTATGTAAATAACAGCAAAGTCGTGCGAGAAGCCATGTGTTTCTTCATGGACATACAACTGGGGAATGGCATTGGCTTTGTACAGTTTCCACTCAGATTTGACAGTCTAGATAGGCATGATCGTTATGCTAACAAAAACACTGTTTTATTTGATATTAACTTACGGTGCCTAGATGGAATTCAGGGACCTGTTTATGTTGGTTCAGCATGTATCTTCAGAAGGAAATGCTTAACTGGCTGTGACTCACCAATGTCTTCAAAACGCCCAAGTATGGTGCAAGTACACTCAAAACAGGATGAGAATGGAGAAGAAGCTAGCATAACAGATGAGGAAAAGGAGCTATTGAAGTCACAGACGGATGATGAAAATAAATTTGGGAAGTCCACACTTTTCATGAACTCTTCATTAACAGAACAAGGTGGTGTTGATCCTACTTCCAGTCAGGAAGTCCTGCTTAAAGAAGCTATTCATGTCATGAGTTCTAAATATGAAGACAGAACTCTCTGGGGATATGAGGAGGGTTTAAGCTATGGATCTATAGCAGCAGATACTCTGACAAGTTTGAAGATGCATTGTCATGGTTGGAGGTCTGTATATTGCATGCCAAAAAGAGATCCATTCAGGGGTACAGCTCCTATCAACCTCACAGATAGACTCAACCAGGTGCTGAGATGGGCAGTGGGATCACTTCAGATCCTATTCAGCCGCCATTGCCCTCTTCTGTATGGCTTCAATGGTGGAAAACTCAAGGGACTCCAAAGGATTGCCTATATTAACAGCACTGTCGACCCCTTCAGCTCAATACCCCTCCTAATATATTGCATCATTCCTGCAATATGCTTGCTCACTGATAAATTCATCACACCATCGGTTGGCACTTTTGCTAGTCTAATTTTCATCGCATTGTTCATCTCAATCTTTGCCTCGGCGATTCTTGAATTGAGATGGAGTGGAGTTAGCCTTGAGGAGTGGTGGAGAAGCCAGCAATTTTGGGTGATTGGCAGTGTGTCTGCAAACCTCTTTGCCGTTGTGCAAGGCATTATGGGAGCCCTTCCACTGGGTAGAGTCAACACAAACTTCAGCATTGTATCAAAGGCACCAGATGATGGAGAGTTTCGTGAACTCTATACCATTAGATGGACTGCACTTCTAATACCTCCAACCACCATCATAATTATCAACCTCATTGGTGTTGTGGCTGGCTTCACAGATTCCATAAACAGTGGTGGACATTCTTGGGGAGCACTGCTTGGGAAACTCTTCTTTTCTTTATGGGTTATTGTCCATTTGTACCCTTTCCTTAAAGGTCTAATGGGTAGGCAGAACAGAACACCAACTCTTATTGTCATATGGTCTGTGCTCTTGGCTTCTATCTTCTCCTTGGTTTGGGTGAGAGTTGACCCTTTTGTGTTGAAAACCAAGGGACCTGATGTCAAGCAATGTGGAATCAGTTGCTGA 2916 0.4331 MEASTGLFAGTPNSKELVAIQGPDEPKPVKNLDGQLCEICGDSVGLTVEGDLFVACEECGFPVCRPCYEYERREGTQVCPQCHTRYKRIKGSPRVEGDEDEDDVDDIEHEFKNEQVQKGHMIHGDDNGSSKSGLAKVNGELLSTSVGEPGAKLDEKEKIDEWILRQGNLWPETDSSVDHEKAMKEPLSRKVAIPSGKLSPYRMMVVARFLLLLLFFQYRIFHPVPDAVGLWFISVTCEIWLALSWMIDQIPKWFPIDRETYLDRLSIRFEQENKPNMLSPIDIIVTTVDPIKEPPLVTANTVLSILALDYPADKISCYVSDDGASMLTFEALQETAEFSRKWVPFCKKFSIEPRAPEKYFSEKIDFLKDKLQSTYVKERRTMKREYEEFKVRINALVAKSMRVPPEGWTMKDETPWPGNNPKDHPSMIQVLLPHNVGNELPCLVYTSREKRPAFQHHGKAGAINALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQLGNGIGFVQFPLRFDSLDRHDRYANKNTVLFDINLRCLDGIQGPVYVGSACIFRRKCLTGCDSPMSSKRPSMVQVHSKQDENGEEASITDEEKELLKSQTDDENKFGKSTLFMNSSLTEQGGVDPTSSQEVLLKEAIHVMSSKYEDRTLWGYEEGLSYGSIAADTLTSLKMHCHGWRSVYCMPKRDPFRGTAPINLTDRLNQVLRWAVGSLQILFSRHCPLLYGFNGGKLKGLQRIAYINSTVDPFSSIPLLIYCIIPAICLLTDKFITPSVGTFASLIFIALFISIFASAILELRWSGVSLEEWWRSQQFWVIGSVSANLFAVVQGIMGALPLGRVNTNFSIVSKAPDDGEFRELYTIRWTALLIPPTTIIIINLIGVVAGFTDSINSGGHSWGALLGKLFFSLWVIVHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRVDPFVLKTKGPDVKQCGISC 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02447 971 MobiDBLite consensus disorder prediction 574 605 - -
Phco7g02447 971 SUPERFAMILY Nucleotide-diphospho-sugar transferases 281 789 IPR029044 -
Phco7g02447 971 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Phco7g02447 971 Coils Coil 379 399 - -
Phco7g02447 971 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 185 938 - -
Phco7g02447 971 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Phco7g02447 971 CDD mRING-HC-C4C4_CesA 35 85 - -
Phco7g02447 971 MobiDBLite consensus disorder prediction 579 605 - -
Phco7g02447 971 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 432 568 IPR029044 -
Phco7g02447 971 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 269 377 IPR029044 -
Phco7g02447 971 SUPERFAMILY RING/U-box 22 107 - -
Phco7g02447 971 FunFam Cellulose synthase 19 110 - -
Phco7g02447 971 Pfam Cellulose synthase 281 965 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02447 Phco-Chr7 42692887 42698312 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02447 7 42692887 42698312 Phco8g01688 8 17399155 17407561 PCT