Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02436 ATGTCCAAGCTGCTTCTTCTACCCTCTCTTCCCCTCATACCCTCCCCTCACCGTTACGACACTTTTTCTTCCGCTTCTGACCTTCAATTTCAATGCCGATTCTCCTTCCACTCTCTCTCTCCCTTCCGCTCCCACGCGCGCAGACGAGACCCTTCCCTTCGCGCTTTCGATTCCTCTTCCGACGCCAAAACCAACCAAGAATTGAAAGAAGTGCCAACAGAAGAGGGCGTTCAAGATCAGAGTGTTGGGATTACGGACGAGGATTATCCAAGTGGCGAGTTCGATTTCAAACCGGTTACCGGATGGAGCAGCTTCCTCGTTAAGCTTAAGATGCTGGTTGCGTTCCCATGGGAGCGTGTGCGCAAGGGCAGCGTTCTCACAATGAAGCTTCGTGGCCAGATATCTGATCAAGTGAAGAGTAGGTTCTCTCCGGGACTTTCTTTGCCTCAAATTTGTGAGAACTTTTTGAAAGCAGCATACGATCCTCGTATTTCTGGGATCTATCTTCATATTGATAGTTTAAATTGCGGGTGGGGTAAAGTAGAAGAAATTCGAAGGCATATATTGGATTTCAAAAAATCAGGAAAATTTATTCTGGCTTATGTGCCTTTATGTCAAGAAAAAGAGTATTACCTTGCATGTGCATGTGACGAGATATACTCCCCACCCAGTGCTTACTTTTCGTTGTTTGGATTGACTGTTCAAGCCTCATTCCTCAGAGGTATTTTAGATAACATAGGAATTGAACCGCAAGTGGAAAGGATAGGAAAATACAAAAGTGCTGGTGATCAACTAGCTCGAAGAACCATGTCTGAGGAAAATTGTGAGATGCTGACTGCATTGCTTGATAATATCTATACAAATTGGCTGGATAAAGTCTCTTCTTCCAACGGAAAAAGTAGAGAAGATATTGAGAAACTCATAAATGAAGGTGTTTATCGAGTTGACAAGCTGAAAGAAGAGGGACTCATATCAAATATAATCTATGATGACGAGATTATCACCATGTTGAAGGAGAGACTTGGAGTGAAACTTGATAAAGATCTGCCTATGGTGGACTACAGGAAATACTCTCGAGTTAGGAAATGGACTGTTGGAATATCAGGTGGTAGAGAACTTATAGCCATTATCCGAGCATCAGGGAGCATTAGTCGTGTAGAGAGTCAATTAAGTGTCTCTAGCTCAGGCATCACTGCGGAGAAGTTTATTGAAAAGATTCGAACTGTCAGAGAGTCAAAAAAATTTAAGGCTGCTATCATTAGAATTGACAGTCCTGGAGGTGATGCTCTTGCTTCTGATTTGATGTGGAGAGAAATCCGGCTTTTGGCTGCTAAAAAACCAGTCGTTGCTTCAATGTCTGATGTGGCAGCAAGCGGAGGGTACTACATGGCAATGGGAGCTGATGCTATTGTGGCAGAAAGCCTTACCTTAACTGGTTCAATTGGAGTGGTCACAGGAAAATTTAACCTGGGGAAACTGTATGAGAAGATTGGCTTTAACAAAGAAATTATATCAAGGGGAAGATATGCTGAGCTCCTTGCTGCTGAACAACGTCCTTTCAGACCAGATGAAGCAGAGTTATTTGCCAAATCAGCCAGGCATGCTTATAAACAATTTCGGGACAAGGCTGCTTTGTCCAGATCAATGACTGTAGAAAAGATGGAGGAGGTTGCACAGGGAAGGGTTTGGACTGGTAACGATGCAGCATCGCATGGTTTAGTTGATGCTATTGGCGGGCTTTCTCGTGCTATTGCCATAGCAAAAGTTAAGGCCAATATACCTCAAGACAGTCAGGTTACACTTGTGGAGATCTCCAGATCCAGCCCTTCTCTACCCGAGATCTTGTTAGGTGTAGGGAGTTCCCTCGTTGGAGCTGACAGAATGGTGAAGGAACTGCTACAGGGCATGACATTTTCTGATGGAGTTCAAGCCCGGATGGATGGAATCATGTTTCAGACATTGGAAGAATATCCTTCTGGGAATCCCATTTTGTCAATAATAAAAGATTACCTCAATTCCCTGTAG 2025 0.438 MSKLLLLPSLPLIPSPHRYDTFSSASDLQFQCRFSFHSLSPFRSHARRRDPSLRAFDSSSDAKTNQELKEVPTEEGVQDQSVGITDEDYPSGEFDFKPVTGWSSFLVKLKMLVAFPWERVRKGSVLTMKLRGQISDQVKSRFSPGLSLPQICENFLKAAYDPRISGIYLHIDSLNCGWGKVEEIRRHILDFKKSGKFILAYVPLCQEKEYYLACACDEIYSPPSAYFSLFGLTVQASFLRGILDNIGIEPQVERIGKYKSAGDQLARRTMSEENCEMLTALLDNIYTNWLDKVSSSNGKSREDIEKLINEGVYRVDKLKEEGLISNIIYDDEIITMLKERLGVKLDKDLPMVDYRKYSRVRKWTVGISGGRELIAIIRASGSISRVESQLSVSSSGITAEKFIEKIRTVRESKKFKAAIIRIDSPGGDALASDLMWREIRLLAAKKPVVASMSDVAASGGYYMAMGADAIVAESLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGRYAELLAAEQRPFRPDEAELFAKSARHAYKQFRDKAALSRSMTVEKMEEVAQGRVWTGNDAASHGLVDAIGGLSRAIAIAKVKANIPQDSQVTLVEISRSSPSLPEILLGVGSSLVGADRMVKELLQGMTFSDGVQARMDGIMFQTLEEYPSGNPILSIIKDYLNSL 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02436 674 MobiDBLite consensus disorder prediction 53 84 - -
Phco7g02436 674 CDD S49_SppA_67K_type 126 339 IPR047217 -
Phco7g02436 674 SUPERFAMILY ClpP/crotonase 374 579 IPR029045 -
Phco7g02436 674 CDD S49_Sppa_N_C 374 588 IPR047272 -
Phco7g02436 674 PANTHER PROTEASE 4 78 673 - -
Phco7g02436 674 Pfam Peptidase family S49 442 592 IPR002142 GO:0006508|GO:0008233
Phco7g02436 674 Pfam Peptidase family S49 191 343 IPR002142 GO:0006508|GO:0008233
Phco7g02436 674 Gene3D - 370 518 - -
Phco7g02436 674 PIRSF Protease_4_SppA 58 674 IPR004634 GO:0006465|GO:0008233|GO:0016020
Phco7g02436 674 Gene3D - 523 645 - -
Phco7g02436 674 Gene3D - 266 359 - -
Phco7g02436 674 Gene3D - 123 265 - -
Phco7g02436 674 NCBIfam signal peptide peptidase SppA 374 588 IPR004635 GO:0006508|GO:0008233
Phco7g02436 674 SUPERFAMILY ClpP/crotonase 115 332 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02436 Phco-Chr7 42509862 42524651 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01446 8 14938713 14947478 Phco7g02436 7 42509862 42524651 PCT