Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02380 ATGAAGGATCCAGAGGAGTACCAAGTGAAGTCTAGAAGGCCTCTTTCGAAACCCACAGAACGTAGAAGAAGGTGCAGGAGGAGGAGCCAGTGCAAGCCAGAGAATTTACAAGAAGCTGAACTTGATCCACAGCTTGCTTCCTCTGCCACTTGCAAGAGTCTTGTGTTTCATCAAAGGCCTGGCTTTGGCCAACTTGGGACTAAGTGTCTCATCAAAGCTAACCACTTCCTTGCAGATATATCAGTATCTGACTTGAGCCATTACAATGTTAAAATCACACCTGAAGTTACTTCACGAAAAACAAGCAAGGCTATCATAGCAGAGTTGGTGAGGGTTCACAGGCACACTGGCTTAGCCACGAGGCTCCCTGTGTATGATGGAGGAAGAAACCTTTACACTTCTGGTTTGCTTCCTTTTACACACAAAGAATTCAATGTAACATTGAGTGAGGATGATGATGCCACCAGTGTTACCAGGGCAAGAGAGTTTAAGGTGTTAATCAAGTTTGCAACTCATGTTAGCATGCATCAGCTACGTGACCTTTTAAGTGGAAAGCAAGTGGACAATCCACAGGAAGCTCTAACCGTCTTTGATATTGTGTTAAGGGAGCTTGCGGCTCAGAGTTACGTGTCAATTGGGAGGTTTCTTTATTCTCCGGATGTAAGAAAACCACAGCAGTTGGGTGGTGGCCTTGAATCGTGGAGGGGCTTCTACCAGAGTATAAGGCCTACTCAGATGGGATTATCACTTAACATTGATATGTCATCAATGGCTTTTATTGAACCACTACCTGTGATTGACTTTGTTGCTCAAATTTTGGGAAAAGATGTGCACTCAAAGCCATTATCGGATGCAGATCGTGTCAAGATAAAAAAAGCCCTAAGAGGTGTAAAAGTTGAAGTTACACACAGAGGAAATTTCCGAAGGAAGTATAGAATATCAGGACTGACTTCACAGCCTACAAGGGAGCTTATTTTCCCTCTTGATGAGCAAATGAACATGAAATCAGTAGTTGATTATTTTCAAGAAATGTATGGATTTACTATCAAATATTCTCATCTACCTTGCCTTCAAGTAGGAAGCCAAAGGAAGGTGAACTATTTGCCCATGGAGGCATGCAAAATAGTTGAGGGCCAGAGATATACAAAAGGGCTAAATGAAAAACAGATAACTTCTCTGCTGAAGTTCTCATGTCAGAGACCCCGAGAACAAGAGGCAGACATTTTACAGACAATGCAACAAAACAATTACGACAATAATCCGTATGCAAAAGAGTTTGGCATCAGCATAGACAACAAGCTTGCATCCGTTGAGGCTCGGGTTCTTCCACCTCCTTGGTTGAAATATCACGACACTGGAAGAGAGAAAGAATACTTGCCACAAGTTGGTCAGTGGAACATGATGAACAAGAAAGTAATAAATGGAAGTACTGTAAGATATTGGGCATGTATCAATTTCTCTCGAAGTGTACAGGAAAGTACAGCTCGTGGATTTTGCCAACAGTTAGTTCAGATGTGCCAAATCTCAGGCATGGAATTCAGTCAGGACCCTGTCATTCCTATATATTCTGCAAGACCAGATCAGGTAAAGAAAGCTTTGAATTATGTGCATTCTGCTGCTATGGATAAACTCGGAGGGAAAGAGCTAGAGTTACTGATTGCCGTTCTTCCAGACAATAATGGCTCTCTGTATGGTGATCTCAAAAGAATTTGCGAAACAGATCTGGGGTTGATTTCTCAATGTTGCCTTACAAAACATGTATTCAAGATCAATAGACAATATCTTGCAAATGTGGCACTAAAAATAAATGTCAAGATGGGAGGAAGAAACACAGTACTTTTGGATGCTTTAAGTTGGAGGATTCCACTGGTTAGTGATATTCCAACAATAATATTTGGAGCTGATGTAACTCATCCAGAATCAGGAGAGGATTCTTGTCCATCCATTGCTGCGGTTGTTGCCTCCCAGGACTGGCCTGAAGTAACAAAGTATGCAGGGTTGGTTTGTGCTCAGCCTCATCGAGAAGAACTTATTCAAGATCTTTTCAGATCTTGGAAAGATCCACAGAGGGGTGTAACTTATGGTGGTATGATCAGGGAGCTTTTACTATCATTTAAGAAAGCAACAGGACAAAAACCATTGAGAATAATCTTTTACAGGGATGGGGTAAGTGAAGGACAGTTCTACCAGGTTTTGCTATACGAGCTTGATGCCATCCGCAAGGCTTGTGCATCTTTGGAACCTAGTTACCAGCCACCAGTAACATTTGTAGTAGTTCAAAAGCGGCATCACACTAGACTCTTTGCAAACAATCACGATGACAGAAATAGTACTGATAAGAGTGGGAATATCTTACCTGGTACTGTGGTAGATTCTAAGATCTGTCATCCTTCTGAATTCGACTTCTACTTATGCAGTCATGCAGGAATTCAGGGTACAAGCAGACCAGCACACTACCATGTCCTCTGGGACGAGAACAATTTCACTGCAGATGAGATTCAGTCTCTTACCAACAATTTATGCTACACTTATGCAAGATGTACACGGTCGGTTTCTGTAGTGCCTCCAGCATACTATGCTCATCTAGCAGCCTACAGGGCTCGATTCTACATGGAACCTGATGTTGTTGAGATTACTAAACTGCGAGGCACAAGATCGAAAGAGGGGCCAGTTCGGCCACTGCCTGCTCTGAAAGAGAAGGTGAAAAATGTTATGTTTTACTGTTGA 2727 0.4228 MKDPEEYQVKSRRPLSKPTERRRRCRRRSQCKPENLQEAELDPQLASSATCKSLVFHQRPGFGQLGTKCLIKANHFLADISVSDLSHYNVKITPEVTSRKTSKAIIAELVRVHRHTGLATRLPVYDGGRNLYTSGLLPFTHKEFNVTLSEDDDATSVTRAREFKVLIKFATHVSMHQLRDLLSGKQVDNPQEALTVFDIVLRELAAQSYVSIGRFLYSPDVRKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGNFRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFQEMYGFTIKYSHLPCLQVGSQRKVNYLPMEACKIVEGQRYTKGLNEKQITSLLKFSCQRPREQEADILQTMQQNNYDNNPYAKEFGISIDNKLASVEARVLPPPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSTVRYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQDPVIPIYSARPDQVKKALNYVHSAAMDKLGGKELELLIAVLPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKINRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFRSWKDPQRGVTYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFANNHDDRNSTDKSGNILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVVEITKLRGTRSKEGPVRPLPALKEKVKNVMFYC 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02380 908 Gene3D - 620 908 IPR036397 GO:0003676
Phco7g02380 908 SMART PAZ_2_a_3 267 399 IPR003100 GO:0005515
Phco7g02380 908 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 55 872 - -
Phco7g02380 908 MobiDBLite consensus disorder prediction 1 15 - -
Phco7g02380 908 ProSiteProfiles PAZ domain profile. 263 377 IPR003100 GO:0005515
Phco7g02380 908 SMART DUF1785_2 210 262 IPR014811 -
Phco7g02380 908 FunFam protein argonaute 10-like 620 908 - -
Phco7g02380 908 Pfam N-terminal domain of argonaute 68 201 IPR032474 -
Phco7g02380 908 SMART Piwi_a_2 551 872 IPR003165 GO:0003676
Phco7g02380 908 Gene3D paz domain 257 381 - -
Phco7g02380 908 ProSiteProfiles Piwi domain profile. 551 872 IPR003165 GO:0003676
Phco7g02380 908 MobiDBLite consensus disorder prediction 1 31 - -
Phco7g02380 908 Pfam PAZ domain 267 393 IPR003100 GO:0005515
Phco7g02380 908 Pfam Argonaute linker 2 domain 405 449 IPR032472 -
Phco7g02380 908 Gene3D - 441 614 - -
Phco7g02380 908 SUPERFAMILY Ribonuclease H-like 540 873 IPR012337 -
Phco7g02380 908 Pfam Piwi domain 552 871 IPR003165 GO:0003676
Phco7g02380 908 CDD PAZ_argonaute_like 262 376 - -
Phco7g02380 908 Pfam Mid domain of argonaute 460 537 IPR032473 -
Phco7g02380 908 FunFam Protein argonaute-2 256 382 - -
Phco7g02380 908 FunFam Argonaute 10 441 614 - -
Phco7g02380 908 Pfam Argonaute linker 1 domain 211 260 IPR014811 -
Phco7g02380 908 CDD Piwi_ago-like 421 871 IPR045246 -
Phco7g02380 908 SUPERFAMILY PAZ domain 258 418 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02380 Phco-Chr7 41633611 41640291 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02380 7 41633611 41640291 Phco7g02380 7 41633611 41640291 ECH
Phco8g01519 8 15651446 15659364 Phco7g02380 7 41633611 41640291 PCT