Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02347 ATGAAGAAGGCTTTTGGAAAAATCAGTGGTGATCTTAAGGTGCTGCATAGAAGTGGTGGTGAATTGCAGGGACTAGATGCAGCAATTGTTAAGGCAACAAGCTATAAGCATAAATTACCAAAGGAAAAGCACATTCGTAGTACCCATGTCAACTTTGTTGCTTGCAGCAACCCCAACATGCACAACCATACTGCAACAACGACTAAGTCCAAACTTCTAAAAACCAAGGCAATAGTGAAAGTGTTTGACTCAACTCTTATTGCACCTATCTACTTCCTACAGCTACCAAAGGTTCTTCCCCAACTAGAAAATCAGACAATGCTCCAACCAGAGCTATGCATTTGTGACTTCTACAGATCGGAGTGGTACCGAGCAATTTTTCAATCACTTTCTCCATCAAAACCTCGCAATGAGGTCATTTACTGCATACATGGTCTTACGAAGCGTTTTATCCAAACTAATAATTGGGCTGTTGCAATGAAAACTCTTATAGTCTTACATCGTGCCATAAGGGAACTTGACTCCTCAGTTTTGGACGAGTTTGTCAACTATAGTAATAAATATAGCGAAAAGCTTGACACACAGGACTTGTTGGACCAATTGCCAGCCCTACAAAACCTCCTCTCCAGACTTCTAGATTGCAGTGTTGCTGGTGAAAGTGTCAAATTATATGTTGCTATAACTGTTAGAGTGGTCGAATTACTTGACAAGTTTTTCGAGATGTACCATAATGATGCTTGTAGTTCACTTCGAATTTATAAAAAATCAGTGAGTCAGGCAGAAAGGTTAACTGAGTTCTTTGAAACTTGCAAAGGATTAGAATTTGGAAGGGGGAAGAAATTCATCAACATTAAAATGCCTCCCTCTTCTTTTATTACTACCATGGAAGAATATATTAAGGAGGCTCCAAGCTCCTTAATGCTTGAATACAACATGGATGAGAATGGCGAAGAAGCTATCGAAAACAAAGATGCAGGTGATTTTTTGACTATAAATGACGATGTTGTTGATAAGTCAACAAATGGTTCTAATGAAAACAACATGGCTGTGCCACCACCTGCTGAACTTATGGGTTTGTATGACTTACTAACAGGAGCATCTGAATTTGAAGAGAAATCTCTAACAAATACATTTATCCCAACTGAAAACAGTTTAAACTCCAATGATGATGAGAATAGGAGAAGCCCAGTACTAGGTTGGGAGCTTGCTCTTTTTAGTGAACCAGAAAATTATAATGCGACTGAGATGGAGACTACTGAAGAGAAGGTTGGTGAAATGGAGTTCTGGAAAGATGACAGTGTTAATGATGAGATAAATGCTGAGACACAACAAAGTGTAACTCACTTTACTACCCAAGATGAACTTTCTGCACTTCCTAACATGTCATCAAGAATTCCAGATCAAATGGGGGACATGCCTTACCAGCATTTGCAGCAACAACATGAACCTTCTATGGCAAATAAAAAATCAACCAATCCCTTTGAAGAAACAAATATGTTGCCTTCAACTATGCCAACACATCCAACTCAAACTACATAG 1539 0.3886 MKKAFGKISGDLKVLHRSGGELQGLDAAIVKATSYKHKLPKEKHIRSTHVNFVACSNPNMHNHTATTTKSKLLKTKAIVKVFDSTLIAPIYFLQLPKVLPQLENQTMLQPELCICDFYRSEWYRAIFQSLSPSKPRNEVIYCIHGLTKRFIQTNNWAVAMKTLIVLHRAIRELDSSVLDEFVNYSNKYSEKLDTQDLLDQLPALQNLLSRLLDCSVAGESVKLYVAITVRVVELLDKFFEMYHNDACSSLRIYKKSVSQAERLTEFFETCKGLEFGRGKKFINIKMPPSSFITTMEEYIKEAPSSLMLEYNMDENGEEAIENKDAGDFLTINDDVVDKSTNGSNENNMAVPPPAELMGLYDLLTGASEFEEKSLTNTFIPTENSLNSNDDENRRSPVLGWELALFSEPENYNATEMETTEEKVGEMEFWKDDSVNDEINAETQQSVTHFTTQDELSALPNMSSRIPDQMGDMPYQHLQQQHEPSMANKKSTNPFEETNMLPSTMPTHPTQTT 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02347 512 PANTHER CLATHRIN ASSEMBLY PROTEIN 16 187 IPR045192 GO:0048268|GO:0072583
Phco7g02347 512 SUPERFAMILY GAT-like domain 187 301 - -
Phco7g02347 512 Gene3D ANTH domain 215 279 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Phco7g02347 512 Gene3D - 7 213 IPR008942 -
Phco7g02347 512 Pfam ANTH domain 218 301 IPR011417 GO:0005543
Phco7g02347 512 Pfam ANTH domain 134 189 IPR011417 GO:0005543
Phco7g02347 512 MobiDBLite consensus disorder prediction 476 512 - -
Phco7g02347 512 SUPERFAMILY ENTH/VHS domain 134 188 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02347 Phco-Chr7 41164383 41177115 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01158 8 12172366 12176758 Phco7g02347 7 41164383 41177115 PCT