Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02282 ATGAACCAGGGTCCGGGCTTATATTTTGATATCGGAAAGAAGGCCAGAGATGTTCTTCATAAAGACTATTGTCAACAACCACCAATTCACTTTAACTACAGATTCTTCGATTGGAATTTAGATCTCTCCTTTGAAGAAGAACTTTTGCATGGACTAAAGGGCATTTTCGCATGTAACATACCTGGCTCTGGGAAGTTGGAACTTCGACACTTGAGCAGATTCAGTGGGTTTAGTGCAAGCATTGGTTTATTGGGAGAGGCAGAAAAAGGATATAACCCTGTAGCAAACCTGTCTGGTCTTATAGGAACCAGAATTCTCTCCCTGGGAGCTAATTTTGCCTATGACCTATCAGGAACAAGGACAACTAACAATCTGAATGCTGGGTTGAGCCTGAACAGTCCCTACCTTGTTGCTTCCGCGACCTTGCATGACTATTTTCAAACTTTGAAAGGTTGCTGTTATTTTGAAGTGAATCCCCTGACCAAGACTGCAATTGCAGCAGAGGTGAAGTATGACCTTGCAGATGATGAGACTACTGGTGTAACAGTCGGTGCTCAGCATGCATTGTTTCCTTGGACGTTGTTAAAGGCTCGACTAAGCAGTAGTGGCAGGGTAGGCGCTCTTATTCAACAGAAGTTAGGGAGGAAGTTTTCCATAACTGTGGCAGGAGAGGTCAATTTGAATGAGAAAGATAAAGAAAAGTTTCCCAAGGTTGGAGTCTTCATGGCTATCAAATAA 738 0.4295 MNQGPGLYFDIGKKARDVLHKDYCQQPPIHFNYRFFDWNLDLSFEEELLHGLKGIFACNIPGSGKLELRHLSRFSGFSASIGLLGEAEKGYNPVANLSGLIGTRILSLGANFAYDLSGTRTTNNLNAGLSLNSPYLVASATLHDYFQTLKGCCYFEVNPLTKTAIAAEVKYDLADDETTGVTVGAQHALFPWTLLKARLSSSGRVGALIQQKLGRKFSITVAGEVNLNEKDKEKFPKVGVFMAIK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02282 245 FunFam Mitochondrial outer membrane protein porin 1 isoform A 2 245 - -
Phco7g02282 245 Pfam Eukaryotic porin 39 235 IPR027246 GO:0005741|GO:0055085
Phco7g02282 245 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 46 244 IPR001925 GO:0005741|GO:0008308|GO:0098656
Phco7g02282 245 Gene3D Porin 3 245 IPR023614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02282 Phco-Chr7 40192168 40193908 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01314 8 13677451 13679312 Phco7g02282 7 40192168 40193908 ECH
Phco3g02794 3 54378834 54384258 Phco7g02282 7 40192168 40193908 ECH
Phco7g02282 7 40192168 40193908 Phco7g02282 7 40192168 40193908 ECH