Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g02794 ATGATAAACTATGAATACAAACACTCTCCGTTCTTCCTTCACCAAATTTCTCGAGATCCCCATTTTCTCCGAATCGAAGCCATGGCTAAGGGTCCCGGTCTCTACTCTGATATCGGCAAGAAAGCCAGGGATCTGCTGTTCAAGGACTACCACAGTGACCAGAAGTTCACCGTCACCACCTACTCGCCCACTGGAGTTGCTATTACCTCATCAGGAACCAGGAAGGGTGAACTGTTTCTGGCTGATGTCAATACCCAGTTGAAGAACAAAAACATCACTACTGATATCAAAGTTGATACAGATTCTAATCTCTTCACAACTATCACTGTCAATGAACCTGCTCCTGGTCTTAAGGCTATCTTTAACTTCAAAGTTCCTGACCAGAGGTCTGGAAAGGTGGAACTTCAGTACTTGCATGACTATGCTGGAATAAGCACCAGTGTTGGGTTGACGGCAAATCCAATTGTCAACTTCTCTGGTGTTGTAGGAACCAATATTCTTGCTCTTGGTGCTGATCTTTCTTTTGACACCAAAATTGGGGAGTTGACAAAATCCAATGCTGGACTGAGCTTCACTAAGGATGACTTGATTGCCTCATTGACTCTGAATGACAAAGGTGATGCTCTGAATGCTGCATATTATCATGTAGTTAACCCCTTGACCAACACTGCTGTTGGTGCTGAGGTCACTCATCGATTCTCAACTAATGAGAACACTCTCACCCTTGGTACTCAACATGCATTGGATCCATTGACCACATTGAAGGCACGTGTCAACAACTTTGGTAAGACAAGTGCTCTCATCCAGCATGAGTGGCGTCCCAAATCATTTTTTACAATTTCTGGTGAGGTAGACACCAAGGCCATTGAAAAGAGTGCTAAGGTTGGATTGAGTTTGGTTCTCAAACCCTAA 912 0.4397 MINYEYKHSPFFLHQISRDPHFLRIEAMAKGPGLYSDIGKKARDLLFKDYHSDQKFTVTTYSPTGVAITSSGTRKGELFLADVNTQLKNKNITTDIKVDTDSNLFTTITVNEPAPGLKAIFNFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSGVVGTNILALGADLSFDTKIGELTKSNAGLSFTKDDLIASLTLNDKGDALNAAYYHVVNPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKTSALIQHEWRPKSFFTISGEVDTKAIEKSAKVGLSLVLKP 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g02794 303 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 28 303 IPR001925 GO:0005741|GO:0008308|GO:0098656
Phco3g02794 303 FunFam Outer mitochondrial membrane protein porin 28 302 - -
Phco3g02794 303 Pfam Eukaryotic porin 31 296 IPR027246 GO:0005741|GO:0055085
Phco3g02794 303 ProSitePatterns Eukaryotic mitochondrial porin signature. 246 268 IPR001925 GO:0005741|GO:0008308|GO:0098656
Phco3g02794 303 Gene3D Porin 20 302 IPR023614 -
Phco3g02794 303 CDD Porin3_VDAC 32 302 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g02794 Phco-Chr3 54378834 54384258 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02794 3 54378834 54384258 Phco3g02794 3 54378834 54384258 ECH
Phco3g02794 3 54378834 54384258 Phco8g01314 8 13677451 13679312 ECH
Phco3g02794 3 54378834 54384258 Phco7g02282 7 40192168 40193908 ECH