Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01944 ATGGGGGAGCTCTTAGAGGAAAAGAAACCAGCAGAGGAACCCAAGGTGGAGGAGAAAAAACCAGAGGAACCCGAAAAGAAAGAAGAGGAGAAGAAGGAAGAAACTGCGGCAAAACCAGCGGGAGAGAAAAAACCAGAAGAGGAGAAGGAAGAAGTGATTCCTCCACCTCCACCGCCCCCGCAGGAGATTGTGCTCAAAGTGTTCATGCATTGCGAGGGTTGCGCTCGCAAGGTTCGTCGCTCCCTCAAAGGATTCCCAGGTGTCGAAGATGTACTCACCGATTGCAAATCTCACAAGGTGGTTGTCAAGGGAGAGAAAGCGGATCCTCTGAAGGTTTTGGAGAGAATACAGAGGAAGAGTCACAGACAGGTCGAGCTTCTCTCTCCGATCCCGAAACCTCCAGAGGAGCAGAAGGTCCCGGAAGAAGAAAAGCCAAAGCCCAAGCTCGAAGAGAAAGTAGAAGAGCCTCCGATTGTGACGGTTCTGAAAGTTCACATGCATTGCGAAGCTTGTTCTCTAGAAATCAAGAGACGCATACAGAGAATGAAGGGAGTGGAATCAGCTGAACCCGATCTGAAGAACTCAGTAGTGAGTGTGAAGGGCGTGTATGATCCAGAGAAGTTGGTTGAGTACGTGAACAAGCGAACTGGGAAGCTCGCAGTGATCGTGAAGCAAGAGCCAGAAAAGGAAGAGAAGGTGGAGGAAGCAAAGGAGGAGAAGAAGGAGGAGGTTGAGAAAGAGAAGAAGAGTGGTGAAGGAGAAGAAAACAAGGAAAAGAAAGAGGAAGAAGCAAAGGGTGAGACCAAAGCAGAGGAAACAGCAGCATCTAGTGAAGACAGCAACAAGGTTGTTCCAGAGGTGAAGATTAATGAATACTTCTATAACCCACCAAGGTATGGCATGGAGGTGTATGCATATCCTGCACACCCTGTACACCCTGCATACCCTGCATATTACCATGCCTACCCTGCCCAGATCTTCAGCGATGAGAACCCAAATGCTTGCCCTGTCATGTAA 1017 0.4897 MGELLEEKKPAEEPKVEEKKPEEPEKKEEEKKEETAAKPAGEKKPEEEKEEVIPPPPPPPQEIVLKVFMHCEGCARKVRRSLKGFPGVEDVLTDCKSHKVVVKGEKADPLKVLERIQRKSHRQVELLSPIPKPPEEQKVPEEEKPKPKLEEKVEEPPIVTVLKVHMHCEACSLEIKRRIQRMKGVESAEPDLKNSVVSVKGVYDPEKLVEYVNKRTGKLAVIVKQEPEKEEKVEEAKEEKKEEVEKEKKSGEGEENKEKKEEEAKGETKAEETAASSEDSNKVVPEVKINEYFYNPPRYGMEVYAYPAHPVHPAYPAYYHAYPAQIFSDENPNACPVM 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01944 338 Pfam Heavy-metal-associated domain 162 217 IPR006121 GO:0046872
Phco7g01944 338 Pfam Heavy-metal-associated domain 65 119 IPR006121 GO:0046872
Phco7g01944 338 Coils Coil 226 261 - -
Phco7g01944 338 MobiDBLite consensus disorder prediction 1 61 - -
Phco7g01944 338 MobiDBLite consensus disorder prediction 226 282 - -
Phco7g01944 338 MobiDBLite consensus disorder prediction 122 151 - -
Phco7g01944 338 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 42 338 IPR044577 GO:0046872
Phco7g01944 338 MobiDBLite consensus disorder prediction 1 53 - -
Phco7g01944 338 Gene3D - 59 132 - -
Phco7g01944 338 Gene3D - 157 222 - -
Phco7g01944 338 SUPERFAMILY HMA, heavy metal-associated domain 61 119 IPR036163 GO:0046872
Phco7g01944 338 ProSiteProfiles Heavy-metal-associated domain profile. 157 221 IPR006121 GO:0046872
Phco7g01944 338 CDD HMA 69 125 IPR006121 GO:0046872
Phco7g01944 338 ProSiteProfiles Heavy-metal-associated domain profile. 60 124 IPR006121 GO:0046872
Phco7g01944 338 MobiDBLite consensus disorder prediction 226 276 - -
Phco7g01944 338 SUPERFAMILY HMA, heavy metal-associated domain 159 214 IPR036163 GO:0046872
Phco7g01944 338 CDD HMA 161 218 IPR006121 GO:0046872
Phco7g01944 338 MobiDBLite consensus disorder prediction 135 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01944 Phco-Chr7 31009803 31011508 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01944 7 31009803 31011508 Phco7g01944 7 31009803 31011508 ECH
Phco4g03244 4 53112834 53116926 Phco7g01944 7 31009803 31011508 PCT