Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01919 ATGGGAACAGGCGAGGTTGGAGGAGCTTCTGCAGATTCACATCACCGTGATTCTGACATAGAACTCATAGGTGGTGAAAGGGTACCTCACAGTGGACCACTGAGCAAAAGGGTAGGCAGAAGAAGTTCCAAGTTGAGCAACGCTTCAGCCTCCACTTCCGGCTCTGATGTTGGCCACAGCATATCCCAGGAACAAGATGAAGGAGACTACGTTGAGGTCACTATGGATATCAAAGGAGACTCTGTGGCTCTTCACAGTGTTATACCTGTTGCGGGGAACAGCGATCAGGGGGAAGATGAGAAACTGGTTTTGCTTGGTAAAGGCATGGAGAAGAAAAGGTCCTTTGGTGCTTCTGTTGTGAGAAGTGCTTCCATTCGCATACAACAAGTGTCTCAGGAGCTGAAGCGTTTGGCTTCCTCGTCCAAGCAAGGTGCAACTGCGAGAGTGCACTATGACAGGACCAAATCTGCAGCTTCTCACGCTCTCAAGGGACTCAAGTTTATCAGCAAGACCGATGGGGGTGCAGGGTGGGTTGAGGTTGAAAAGCAATTTGATGCTCTCACTGCTTCCACTAATGGGTACCTGCATCGCTCTCTCTTTGCCAAGTGCATAGGGATGAACAAGGAATCAGAGGCCTTTGCAGGGGAGCTCTTTGATGCACTCTCTAGGAGGAGGGAAATTCAAAGTGATTCTATTAATAAGGTCCAGTTGAAGGACTTTTGGGACCAGATTTCTGACCAGAGTTTCGATTCTAGGCTCAGTACATTCTTTGACATGGTTGATAAAGATGCGGATGGAAGAATCACCGAGGAAGAAATTAAAGAGATTATCTGCCTTAGTGCCACTACCAACAAGCTGGCAAACATACAGAAGCAGGCAGAGGAATATGCAGCTTTGATTATGGAGGAACTTGACCCCGATGACACAGGATTCATCATGGTAAACGACCTAGAGATGCTCTTGTTGCATGGACCGACCCATTCTACAAGAGGAGATAGCAAGTACCTGAGTCAAATGCTAAGCTTAAAGCTTAAGCTCACACATGAAGAAAATCCTATTAGGAGGTGGTATACAAACACCATGTACTTCCTGCAGGACAATTGGCAGAGAACTTGGGTATTGGTATTGTGGATTGTTGTGATGTTAGGTCTATTTGCGTACAAATTTGTTGAGTATAGGAGGAGAAAAGATGCTTATGATGTGATGGGCCATTGTGTATGCATGGCCAAAGGTGCTGCTGAGACACTTAAATTGAACATGGCAATTATCTTTTTACCGGTTTGCCGAAACACCATCACCTGGCTCAGGAACAAGACCAAACTTGGCATTATGGTTCCTTTTGATGACAACCTCAACTTCCATAAGTTGATAGCTGTGGCAGTAGCTATTGGTGTTGGTATACATGGTATCTATCATCTTTCTTGTGACTTTCCTCGACTTATTGATGCAAGTAGTGAGAAGTGGGAGCTGATGGAACCATTTTTTGAAGATCAACCATCAAGTTATTGGTTTTTTGTGAAATCATGGGAAGGAGTAACAGGGATTATAATGGTTGTTCTAATGGCAATAGCTTTCACTTTAGCTACCCCTTGGTTCAGAAGAGGCAGGGTCAAGCTTCCCAAGCCCCTCGATAATCTCACTGGCTTCAACGCCTTTTGGTACTCACATCATCTCTTTGTCATTGTCTATGCCCTGCTCATTGTGCACGGAATAAAACTTTACTTGACCAAAGAATGGTACAAGAAAACGACCTGGATGTATTTGGCTATTCCCATTGTTATATACTTCTTAGAAAGATTGACTCGAGCACTCAGATCAAGCATAAAGCCTGTGAGAATATTAAAGGTGGCTGTTTATCCTGGAAATGTGTTGGCTCTTCATATGTCAAAGCCCCAGGGATTCAGATACAAGAGTGGACAATACATGTTTCTTAATTGTGCCGCTGTGTCTCCATTTGAATGGCATCCATTTTCTATAACCTCTGCCCCTGGTGATGATTACCTTAGCGTTCATATCAGAACACTTGGTGATTGGACCCGGAGTCTCAAAGTCAAGTTCTCAGAGTGTTGCCAGCCACCTGACAACGGCAAGAGTGGACTTCTAAGAGCTGATAACTTGCAAGGAGATGGAAGTCCCAGTGCTCTCCCTAAAGTTCTGATTGATGGTCCATATGGAGCGCCAGCCCAAGACTACAAGCAATATGAGGTGGTGTTGCTGGTGGGGCTGGGAATAGGAGCCACCCCAATGATCAGTATTGTGAAGGACATAGTGAACAACATGAAGGCCATGGAAGAGGAAGAGGGGAGGAACATGGAGGAGGGAGAAATTGGGAAATCAGCAAGAACAACCCCACAGAAAAGAAATGGTGCGAGCAAGTTTAACACTAGGAGGGCTTACTTTTATTGGGTGACAAGGGAGCAAGGTTCTTTTGATTGGTTTAAAGGGGTGATGAATGAGGTGGCTGAAGAAGATCACAAGGGTGTGATTGAACTCCACAACTATTGCACCAGTGTGTATGAAGAGGGTGATGCTCGCTCTGCTCTCATTGCCATGTTGCAATCTCTGAACCATGCTAAGAATGGCGTGGACATTGTCTCTGGCACGCGTGTCAAATCCCACTTTGCCAAACCCAATTGGCGCAGTGTCTACAAACGCATTGCAGTTACTTATCCAAGGGCTCGTGTTGGGGTGTTTTACTGTGGGCCACCAGCGTTAACGAAAGAGCTTGGTCAGTTAGCTTCGGATTTCTCTCGGAATACAACCACCAGATATGATTTCCACAAAGAAAATTTCTAA 2796 0.4531 MGTGEVGGASADSHHRDSDIELIGGERVPHSGPLSKRVGRRSSKLSNASASTSGSDVGHSISQEQDEGDYVEVTMDIKGDSVALHSVIPVAGNSDQGEDEKLVLLGKGMEKKRSFGASVVRSASIRIQQVSQELKRLASSSKQGATARVHYDRTKSAASHALKGLKFISKTDGGAGWVEVEKQFDALTASTNGYLHRSLFAKCIGMNKESEAFAGELFDALSRRREIQSDSINKVQLKDFWDQISDQSFDSRLSTFFDMVDKDADGRITEEEIKEIICLSATTNKLANIQKQAEEYAALIMEELDPDDTGFIMVNDLEMLLLHGPTHSTRGDSKYLSQMLSLKLKLTHEENPIRRWYTNTMYFLQDNWQRTWVLVLWIVVMLGLFAYKFVEYRRRKDAYDVMGHCVCMAKGAAETLKLNMAIIFLPVCRNTITWLRNKTKLGIMVPFDDNLNFHKLIAVAVAIGVGIHGIYHLSCDFPRLIDASSEKWELMEPFFEDQPSSYWFFVKSWEGVTGIIMVVLMAIAFTLATPWFRRGRVKLPKPLDNLTGFNAFWYSHHLFVIVYALLIVHGIKLYLTKEWYKKTTWMYLAIPIVIYFLERLTRALRSSIKPVRILKVAVYPGNVLALHMSKPQGFRYKSGQYMFLNCAAVSPFEWHPFSITSAPGDDYLSVHIRTLGDWTRSLKVKFSECCQPPDNGKSGLLRADNLQGDGSPSALPKVLIDGPYGAPAQDYKQYEVVLLVGLGIGATPMISIVKDIVNNMKAMEEEEGRNMEEGEIGKSARTTPQKRNGASKFNTRRAYFYWVTREQGSFDWFKGVMNEVAEEDHKGVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDIVSGTRVKSHFAKPNWRSVYKRIAVTYPRARVGVFYCGPPALTKELGQLASDFSRNTTTRYDFHKENF 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01919 931 ProSiteProfiles EF-hand calcium-binding domain profile. 248 283 IPR002048 GO:0005509
Phco7g01919 931 Gene3D Translation factors 597 689 - -
Phco7g01919 931 FunFam Respiratory burst oxidase protein A 725 931 - -
Phco7g01919 931 Pfam Ferric reductase like transmembrane component 411 567 IPR013130 -
Phco7g01919 931 Coils Coil 279 299 - -
Phco7g01919 931 ProSitePatterns EF-hand calcium-binding domain. 261 273 IPR018247 -
Phco7g01919 931 Pfam Respiratory burst NADPH oxidase 151 251 IPR013623 GO:0004601|GO:0050664
Phco7g01919 931 MobiDBLite consensus disorder prediction 1 68 - -
Phco7g01919 931 CDD NOX_Duox_like_FAD_NADP 613 931 - -
Phco7g01919 931 SFLD Ferric reductase subgroup (FRE) 353 931 - -
Phco7g01919 931 FunFam Respiratory burst oxidase homolog A 151 269 - -
Phco7g01919 931 SUPERFAMILY EF-hand 178 325 IPR011992 -
Phco7g01919 931 Pfam FAD-binding domain 610 727 IPR013112 GO:0016491
Phco7g01919 931 Gene3D - 725 931 IPR039261 -
Phco7g01919 931 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 731 931 IPR039261 -
Phco7g01919 931 Pfam Ferric reductase NAD binding domain 734 913 IPR013121 GO:0016491
Phco7g01919 931 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 606 730 IPR017927 GO:0016491
Phco7g01919 931 MobiDBLite consensus disorder prediction 10 24 - -
Phco7g01919 931 ProSiteProfiles EF-hand calcium-binding domain profile. 292 327 IPR002048 GO:0005509
Phco7g01919 931 MobiDBLite consensus disorder prediction 767 789 - -
Phco7g01919 931 FunFam Respiratory burst oxidase homolog A 597 689 - -
Phco7g01919 931 SFLD NADPH oxidase subgroup (NOX) 127 931 - -
Phco7g01919 931 SUPERFAMILY Riboflavin synthase domain-like 610 726 IPR017938 -
Phco7g01919 931 PRINTS Cytochrome B-245 heavy chain signature 549 569 IPR000778 GO:0016020|GO:0016491
Phco7g01919 931 PRINTS Cytochrome B-245 heavy chain signature 739 756 IPR000778 GO:0016020|GO:0016491
Phco7g01919 931 PRINTS Cytochrome B-245 heavy chain signature 457 475 IPR000778 GO:0016020|GO:0016491
Phco7g01919 931 PRINTS Cytochrome B-245 heavy chain signature 716 729 IPR000778 GO:0016020|GO:0016491
Phco7g01919 931 MobiDBLite consensus disorder prediction 40 61 - -
Phco7g01919 931 SFLD Ferric Reductase Domain 353 763 - -
Phco7g01919 931 Gene3D - 151 269 - -
Phco7g01919 931 PANTHER NADPH OXIDASE 212 931 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01919 Phco-Chr7 23461891 23467013 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03180 4 52542472 52547559 Phco7g01919 7 23461891 23467013 PCT