Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01893 ATGGAATCAAACGGCGAGAACGGAGGCAGCACGAGCAGAGAGGAACAGGAAGAGGCATTGGTCGCTTTGATCGAACACCGAACCCACGAAGTCAAAAACCTTCGTCACCGCATCGCTTATTACAAAACCCAGCTTGATGAAGCGGAGAAAAGGTTGCAAGACTCTATATCCAAATTGTCTCGCCTTCGAGGTCAGAATAATGCATTGTCATCCCGAACTACCTTAGATGATGGAATTAAAACTGTGAAGACAGAGCGCAGATCAAACAGTCCCATTGATAGAAATGAAGTTTCTATAAAAAATCGACATCAATCTAAACCAGAACTTCTTATCCCTTCAGTGAATCCAAAAATTTCACAACCTGTATTGTTGCCAAAGCCTTCCTCAAAAGCTTCAGTAAGTTCCAGTTCTGAAGCCACTCCTGGAATCCATAACTCTCCAATCACAGGTGATAGCTCTAGGGGAAAATCTGACAAGTCCCATAGTCATAGACTTTCTTCTGAGCAGCAAAAAACTGAAATCAAGGACAAAGGGACAAAAAGGAAATTTGAACAAAAAGAACACAAGGAATTGATTCCTTTAATACGCAAGAGTTCTTCACCAATCTCAGTACAGTGTCAAACAAGCAACCACATCTCAAGTCAACACAAGAGGAAATTGCGGAGTATTGCTTTGTGCCCTGTGAATGATCAGCTTTTTGTGACCAGTGCTCTGGATGGACTGGTCAACTTCTGGCAAATTCAGGCTAAGGGAGCAGGAGCCTCTCGTCTTAGCACAACTGATTGTTCATCCCAAAAGCATCGGAGATGGCCAGAAGATTTAGTTTGGCACCCAGAAGGAAACAGCCTATTTGCAGTATACAGTGCTGATGGTGGTGACTCTCAAGTATCAATTACAAATCTGAATAAAGGACAACAAGGGGGAGAACGTGTAAAGTTCTTAGAGGACAAGCCTCATGTAAAGGGAATTATCAATGGCATTGTTTTTATGCCATGGGAAAATACATGTTTTGTAACTGGTGGAAGTGACCATGCTGTTGTACTTTGGAGTGAGCAGGAAGGTGAGAAGTGGAAACCAAAGGCATTGCATAGGAATCTTCACTCATCTGCTGTCATGGGAGTTGCTGGTATGCAGCACAAGCAGATGGTGTTATCTGTTGGTGCAGATAGAAGAATATTTGGGTATGATGTTCGTGCAGGAAGAGCAGATTTCAAGCATCAGGTTGATAGCAAATGCATGAGTGTCCTGCCCAATCCGTGTGACTTCAATTTATTCATGGTTCAAACAGGGACCCATGAGAGGCAGCTTCGGTTGTTTGATATTAGATTGAGGAATACAGAACTTCATGCTTTTGGATGGAAGCAAGAAAGCAGTGATTCTCAATCAGCTCTGATAAATCAGTCTTGGTCTCCTGATGGACTATATATAACATCTGGTTCTGCAGATCCTGTGATTCACATATTTGATATAAGGTATACTGCTCACAAGCCTTCCCAATCTATAAGAGCACATCAGAAACGAGTCTTCAGAGCCATGTGGCTTCAGTCCATTCCTCTTGTCATTTCCATATCATCCGATCTTAACATTGGACTGCACAAGGTTTACACATGA 1611 0.4252 MESNGENGGSTSREEQEEALVALIEHRTHEVKNLRHRIAYYKTQLDEAEKRLQDSISKLSRLRGQNNALSSRTTLDDGIKTVKTERRSNSPIDRNEVSIKNRHQSKPELLIPSVNPKISQPVLLPKPSSKASVSSSSEATPGIHNSPITGDSSRGKSDKSHSHRLSSEQQKTEIKDKGTKRKFEQKEHKELIPLIRKSSSPISVQCQTSNHISSQHKRKLRSIALCPVNDQLFVTSALDGLVNFWQIQAKGAGASRLSTTDCSSQKHRRWPEDLVWHPEGNSLFAVYSADGGDSQVSITNLNKGQQGGERVKFLEDKPHVKGIINGIVFMPWENTCFVTGGSDHAVVLWSEQEGEKWKPKALHRNLHSSAVMGVAGMQHKQMVLSVGADRRIFGYDVRAGRADFKHQVDSKCMSVLPNPCDFNLFMVQTGTHERQLRLFDIRLRNTELHAFGWKQESSDSQSALINQSWSPDGLYITSGSADPVIHIFDIRYTAHKPSQSIRAHQKRVFRAMWLQSIPLVISISSDLNIGLHKVYT 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01893 536 MobiDBLite consensus disorder prediction 125 153 - -
Phco7g01893 536 MobiDBLite consensus disorder prediction 154 185 - -
Phco7g01893 536 SMART WD40_4 258 300 IPR001680 GO:0005515
Phco7g01893 536 SMART WD40_4 356 396 IPR001680 GO:0005515
Phco7g01893 536 SMART WD40_4 203 246 IPR001680 GO:0005515
Phco7g01893 536 SMART WD40_4 494 533 IPR001680 GO:0005515
Phco7g01893 536 SMART WD40_4 307 350 IPR001680 GO:0005515
Phco7g01893 536 SMART WD40_4 452 489 IPR001680 GO:0005515
Phco7g01893 536 SUPERFAMILY WD40 repeat-like 218 533 IPR036322 GO:0005515
Phco7g01893 536 MobiDBLite consensus disorder prediction 71 185 - -
Phco7g01893 536 Coils Coil 31 65 - -
Phco7g01893 536 Gene3D - 413 536 IPR015943 GO:0005515
Phco7g01893 536 MobiDBLite consensus disorder prediction 78 103 - -
Phco7g01893 536 Gene3D - 130 412 IPR015943 GO:0005515
Phco7g01893 536 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 7 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01893 Phco-Chr7 22483447 22488345 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01893 7 22483447 22488345 Phco7g01893 7 22483447 22488345 ECH
Phco4g03198 4 52693798 52697023 Phco7g01893 7 22483447 22488345 PCT