Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01737 ATGACAACCCCGAACCATTCCTCCAGGAAGACCAAACGCCCAACTAACATTCCCAGAAAGTCCATCTCCCTCCCCGCTCGTAACGGAATCACCGCTCCGGATGATGACGGAGAAAGGACCGTTAAGAAGCTTCGCTTGTCAAAAGCCCTCACCATCCCCGACGGAACCACCGTCTCTGAAGCCTGCAGACGCATGGCCACTCGCCGCATCGACGCCGTTTTGCTCACCGATTCCAATGCTCTGCTTTCCGGAATTCTAACTGACAAGGACATCGCTATGAGAGTCGTCGCCGAGGGGATGAAACCGGAGGAGACCATGGTGTCCAAGGTCATGACGCGGAATCCCGTCTTCGTGACGTCGGATACCCTCGCCATTGAAGCGCTTCAGAAGATGATCCAAGGTAAATTCAGACACCTCCCAGTTGTGGAAAATGGTGAAGTCATTGCCATGCTGGATATCACCAAATGTCTTTACGATGCCATATCTAGGGTGGAAAGAGCTACTGAACAGGGGAGTGCTATTGCTGCCGCAGTTGAGGGAGTGGAACTCCGACAGGCTAGTCATCTATCTGTTACAAATAGTTTTATTGAAACATTGAGGGAGCGCGTGTTCAGACCTTCCCTGACAACTATAGTTGGTGAAAATACAAAGGTTGCTATTGCATCAGTATCAGATCCTGTCTATGTAGCAGCAAAAAGGATGCGGGAGTTGCAAGTAAATTCAGCTGTGATTGTAATGGAAAATAAGATTCAGGGGATACTTACTTCGAAAGACATCCTTATGCGGGTCATGGCTCAAAATCTTTCTCCTGAGGTGACACCTGTGGAAAAGGTCATGACTCCAAACCCAGAATATGCATCTCCGGAGACAACAATTCTTGAGGCACTGACTATGATGCATAATGGGAAGTACTTACATCTTCCTGTGGTGGACAAAGATGGAACTGCTATTGCTTGTTTGGATGTGTTGCAGATAACTCATGCTGCAATTTCTCTGGTTGAAAGTAGTCCCGGAGCATCTAATGATGCGGCAAACACAGTTATGCAAAAATTTTGGGACTCAGCTTTTGCTCTAGAGCCGCCTGAAGATTTTGATAGCCATAGTGAAGCCTCTGGACTGATGACTTTGGACGGGGCAGATACCACAAAGTCTACATATCACTCTGTAGGTTTTGGAAATTCATTTGCTTTTAAATTTGAGGATCTCAATGGCCATGTGCATCGATTCTACTGTGCTGAACATCTAGACGAGCTTCTGTCTGCTGTCATGCAAATAATTGGTGATTTTAATGACGGAGAACGCCCTAAAATTCTGTATAAGGACGATGAAGGTGATGAAATTATTCTTGAGACTGATAACGATCTTGTGGCTGCTGTCAGCTATGCTAGGTCTGCAGGACTGAAGGCTTTAAAATTGGATATGAAGTTTGCCAATTCGACCAAACCAACAGAGGTGCCATCTGGTACAGCCAGTATACAGAAATCCAGTACATTGTCTCTCCGTTCTGGTATTTTTGCGGGTGTTGTTATTCTTACGAGCATTAGCGTATTGGTGTACTTAAAGCGCTCTAAACAGTAA 1578 0.4601 MTTPNHSSRKTKRPTNIPRKSISLPARNGITAPDDDGERTVKKLRLSKALTIPDGTTVSEACRRMATRRIDAVLLTDSNALLSGILTDKDIAMRVVAEGMKPEETMVSKVMTRNPVFVTSDTLAIEALQKMIQGKFRHLPVVENGEVIAMLDITKCLYDAISRVERATEQGSAIAAAVEGVELRQASHLSVTNSFIETLRERVFRPSLTTIVGENTKVAIASVSDPVYVAAKRMRELQVNSAVIVMENKIQGILTSKDILMRVMAQNLSPEVTPVEKVMTPNPEYASPETTILEALTMMHNGKYLHLPVVDKDGTAIACLDVLQITHAAISLVESSPGASNDAANTVMQKFWDSAFALEPPEDFDSHSEASGLMTLDGADTTKSTYHSVGFGNSFAFKFEDLNGHVHRFYCAEHLDELLSAVMQIIGDFNDGERPKILYKDDEGDEIILETDNDLVAAVSYARSAGLKALKLDMKFANSTKPTEVPSGTASIQKSSTLSLRSGIFAGVVILTSISVLVYLKRSKQ 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01737 525 Pfam PB1 domain 397 472 IPR000270 GO:0005515
Phco7g01737 525 SUPERFAMILY CBS-domain pair 216 329 IPR046342 -
Phco7g01737 525 CDD CBS_pair_MUG70_2 215 331 - -
Phco7g01737 525 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 32 463 - -
Phco7g01737 525 MobiDBLite consensus disorder prediction 1 22 - -
Phco7g01737 525 ProSiteProfiles CBS domain profile. 111 168 IPR000644 -
Phco7g01737 525 SUPERFAMILY CBS-domain pair 38 156 IPR046342 -
Phco7g01737 525 ProSiteProfiles CBS domain profile. 279 335 IPR000644 -
Phco7g01737 525 Gene3D - 207 343 IPR046342 -
Phco7g01737 525 ProSiteProfiles CBS domain profile. 45 103 IPR000644 -
Phco7g01737 525 ProSiteProfiles PB1 domain profile. 379 477 IPR000270 GO:0005515
Phco7g01737 525 SMART cbs_1 217 264 IPR000644 -
Phco7g01737 525 SMART cbs_1 114 158 IPR000644 -
Phco7g01737 525 SMART cbs_1 282 330 IPR000644 -
Phco7g01737 525 SMART cbs_1 48 96 IPR000644 -
Phco7g01737 525 CDD CBS_pair_MUG70_1 46 162 - -
Phco7g01737 525 MobiDBLite consensus disorder prediction 1 38 - -
Phco7g01737 525 SMART PB1_new 394 477 IPR000270 GO:0005515
Phco7g01737 525 ProSiteProfiles CBS domain profile. 214 271 IPR000644 -
Phco7g01737 525 Gene3D - 32 176 IPR046342 -
Phco7g01737 525 SUPERFAMILY CAD & PB1 domains 382 472 - -
Phco7g01737 525 Pfam CBS domain 275 314 IPR000644 -
Phco7g01737 525 Pfam CBS domain 47 94 IPR000644 -
Phco7g01737 525 Pfam CBS domain 107 152 IPR000644 -
Phco7g01737 525 Pfam CBS domain 215 263 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01737 Phco-Chr7 17554971 17560071 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01737 7 17554971 17560071 Phco7g01737 7 17554971 17560071 ECH
Phco4g03252 4 53168820 53174931 Phco7g01737 7 17554971 17560071 PCT