Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01711 ATGGTGAGGCTCTTGGGATTGACTCGTGGGGAGGTTGATGAACCCAGGGAAATTGTGTCGAGGTCTAATTTGACAAGTGAGTCCAGTGAAAATGGGTGGCTCATCAGGTTCTTTGACTCATCGTTCTTCTGTGAGTGGATTGCTGTTAGCTACCTGTACAAGCATGACCACTCCGGGGTGCGTGATTACCTCTGTAATAGAATGTACACACTTCCCTTGCACGGAATTGAGAGTTATTTGTTCCAAGTATGTTACATGATGATACATAAGCCAAGTCCATCTTTGGATAAGTTTGTCATAGACGTGTGCTGCAAGTCGCTTAAGATTGCTTTGAAGGTGCATTGGTTCTTATTGGCGGAGCTTGAGGACTCCGATGATAATGAAGGAATTAGTAGGATTCAGGAAAAGTGCCAAATTGCAGCCACCTTAATGGGTGAGTGGCCGCCCTTGATACGGCCTCAAACTGCTTCTACAACTCCTGCTGGCAGGAACCAAGTTTTGAACAAGATATTCTCATCAAAACAGCGATTGTTGTCACTAACATCTTCACCGCCTACTCATAGGTCTCTGTCATTCTCACCTTCATCAGGAAACCATTTGCAGGAGGATGGTAGTGTGCAATCTCCTGAGGAAAACAAGTTATTTAAGAAATTTATGCCAGGTCCAAAAGTTAGAGATGCTTTGCTTTTTAGAAAGTCAGTGGAGAAAGATGACGATGAGTCTGAAAAAGATGGTTTTTTCAAGAGGCTTTTAAGAGATAGCAAGGGTGAAGATGAGTTGGGCCAGAAGATTCGTGATGCTTTTCTCTTCCGTAAGTCTTCTGAGAAGTGTGACGAAGATTCTGAAAAGGATAATTTCTTTAAAAGGTTCTTAAGGGATGGTAGAGGCGATGATGAAGAATCTGAAAGGGATGGTTTCTTTAGAAGGCTCTTAAGAGACAGTAAAGGTGAGGATGAGGATTTGCCCTCTAGTTCAGATGGATTCTTTAAGAGGTTGTTTCGTGATAGCAAGAATGATTCTGAGGATAGAACACCCAATAAGATAATGGAGGATGAAGAAAAAGAGGGTTTTTTCCGAAAGTTTTTCAGAGAGAAATCTGAGGATAAGAAGGATGGGAATGACGAAGTAGATATTGCAAATTCTGAAGATAAGTGTGCAAAGCCTGCTGAAGAGGATGAAAAAGAAGGGTTTTTCAAGAAATTCTTTAAGGATAAATTTGATGACAAGAAAGATACTAGTGACAAAATTGAAGATGGTACAACCAATGTTGAGGAGGAACCTTCTGAATTTTCTTTGTTCAAAAGAATTTTCCGTGTGCATCCTGAAGATGGTAAAAGTAGTTCAGCCAGTGAAAGCAATGGTGGGTTGTATGAAAGTAGTCCAGGTACAGAGAATTTTTTCCGCAAATTGTTTAGAGACCGTGACCGATCAATTGAAGACTCTGAGCTATTGGGGTCAAAAAAGCAGAAAGAGAAGCATCCTGGATCGCCAAAGCATCAAAATGAGAAATCAGGAACAAAACCCCCACTTCCAAATAATCCATCACAGTTCCGGAAAGGAGCTTACCATGAATCATTGGATTTTGTGCTAACATTATGTGAGACATCATTTGGGCTAGTGGATGTATTTCCAGTAGAAGACCGCAAAGATGCCCTGCATGAGTCACTTGCAGAGATCAATTTACATTTAATAGATGCTCACAATACTGGAGGAGTTTGCTTTCCATTAGGAAAGGGCATGTATCGTGTGCTTCATATACCTGAAGATGAAGCTGTTCTCTTGAATTCTAGGGAGAAGGCACCTTACATGATTTGTGTTGAAGTTTTGAGATGTGAAATGCCAAGCAATTCCAAGGAGACATCTAGTTCTCAGAAACTTTCAAAAGGGGGAATTCCTTTGGCAAATGGAGATGCTTTCTTTCAAAAACCACCCCCTTGGGCATATCCATTATGGACAGCTCAAGAAGCATATCGCAATAGCAATGATAGAATGTCCAGATCAACTGCTGAGGCTATTGACCAGGCAATGACCCATATGCCTGATGCAAAAGTCAAATTTGTTAGTGTGAATCTTTCTGTGGAAGCACCATTTCATAGTCGGTCAGAGAATACTGAAGCAGATCTCTGTGGTCCTTCAATTTACAGAGATGGTATACAAGAAGTGGCAAAGTCAGGACATGACAGTGATATGGAGTGGGTACAGGTAGTGTTGAAAGCCTATCCTGGGGTAAAAATGGAAGATATTGAGGATCAAACACCAAAACGGCGGAAGGAACATCGACGTGTTCCAAGTACAGTGGCAATAGAAGAAGTAAAGGCTGCGGCAGCAAAGGGAGAAGCACCCCTTGGACTCCCTTTGAAAGGTGCTGGTCAAGAAGATTCATCAGATGCACCAGCAGGGGCTAATGGAATTATCCCTAAAGCTAGTGATGCATTGTCTGGTGAACTTTGGGAGGTAAAGAAAGAGAGGATCCGTAATGCTTCTGTCCATGGCAATTTACCTGGTTGGGACTTGCGATCTGTTATTGTAAAGAGCGGGGATGATTGTAGGCAGGAGCATCTGGCAGTTCAACTTATTTCACACTTCTATGATATTTTCCAAGAAGCTGGCCTACCTCTCTGGCTGCGCCCATATGAAGTATTATGTACTTCTTCTTACACTGCTCTAATTGAAACAATTCCGGATACGGCTTCTCTACATTCTATAAAGAGTAGATATCCCAACATCTCAAGTTTACGTGATTTTTTCATTGCCAAGTATCAAGATGATTCTCCAAGTTTCAAACTTGCCCAGAGGAACTTTGTAGAAAGTATGGCTGGATATTCCCTGGTTTGCTACCTTCTGCAGGTGAAGGATAGGCACAATGGGAACCTCTTAATGGATGAAGAAGGTCATATTATACATATTGATTTCGGCTTCATGCTTTCTAATTCACCTGGTGGTGTTAATTTTGAAAGTGCACCTTTCAAATTAACCCGAGAGCTTCTTGAGGTCATGGATTCTGATGCTGAGGGAATTCCCAGCGAGTTCTTTGATTATTTCAAGGTTTTATGCATTCAAGGCTTCCTTACCTGCCGTAAGCATGCTGAGCGTGTTATTCTTCTTGTTGAGATGTTGCAGGACTCTGATTTTCCCTGCTTTAAAGGTGGTCCACGGACAATCCAGAACCTACGAAAGCGTTTCCATCTCAATTTAACCGAAGAGCAATGTGTATCTTTGGTGCTTTCCCTCATTAGCAGCAGCCTGGATGCATGGCGGACAAGGCAGTATGACTATTACCAGAGGGTTTTGAACGGGATTTTGTGA 3306 0.4201 MVRLLGLTRGEVDEPREIVSRSNLTSESSENGWLIRFFDSSFFCEWIAVSYLYKHDHSGVRDYLCNRMYTLPLHGIESYLFQVCYMMIHKPSPSLDKFVIDVCCKSLKIALKVHWFLLAELEDSDDNEGISRIQEKCQIAATLMGEWPPLIRPQTASTTPAGRNQVLNKIFSSKQRLLSLTSSPPTHRSLSFSPSSGNHLQEDGSVQSPEENKLFKKFMPGPKVRDALLFRKSVEKDDDESEKDGFFKRLLRDSKGEDELGQKIRDAFLFRKSSEKCDEDSEKDNFFKRFLRDGRGDDEESERDGFFRRLLRDSKGEDEDLPSSSDGFFKRLFRDSKNDSEDRTPNKIMEDEEKEGFFRKFFREKSEDKKDGNDEVDIANSEDKCAKPAEEDEKEGFFKKFFKDKFDDKKDTSDKIEDGTTNVEEEPSEFSLFKRIFRVHPEDGKSSSASESNGGLYESSPGTENFFRKLFRDRDRSIEDSELLGSKKQKEKHPGSPKHQNEKSGTKPPLPNNPSQFRKGAYHESLDFVLTLCETSFGLVDVFPVEDRKDALHESLAEINLHLIDAHNTGGVCFPLGKGMYRVLHIPEDEAVLLNSREKAPYMICVEVLRCEMPSNSKETSSSQKLSKGGIPLANGDAFFQKPPPWAYPLWTAQEAYRNSNDRMSRSTAEAIDQAMTHMPDAKVKFVSVNLSVEAPFHSRSENTEADLCGPSIYRDGIQEVAKSGHDSDMEWVQVVLKAYPGVKMEDIEDQTPKRRKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQEDSSDAPAGANGIIPKASDALSGELWEVKKERIRNASVHGNLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYPNISSLRDFFIAKYQDDSPSFKLAQRNFVESMAGYSLVCYLLQVKDRHNGNLLMDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGIPSEFFDYFKVLCIQGFLTCRKHAERVILLVEMLQDSDFPCFKGGPRTIQNLRKRFHLNLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGIL 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01711 1101 CDD PI4Kc_III_beta 809 1101 - -
Phco7g01711 1101 Gene3D - 898 1099 IPR036940 -
Phco7g01711 1101 MobiDBLite consensus disorder prediction 180 208 - -
Phco7g01711 1101 SUPERFAMILY Protein kinase-like (PK-like) 570 1094 IPR011009 -
Phco7g01711 1101 Gene3D - 44 146 IPR042236 -
Phco7g01711 1101 FunFam phosphatidylinositol 4-kinase beta 1 733 893 - -
Phco7g01711 1101 PANTHER PHOSPHATIDYLINOSITOL KINASE 44 1101 IPR015433 GO:0046854|GO:0048015
Phco7g01711 1101 MobiDBLite consensus disorder prediction 782 803 - -
Phco7g01711 1101 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 843 857 IPR018936 GO:0016301
Phco7g01711 1101 FunFam Phosphatidylinositol 4-kinase beta 1 898 1099 - -
Phco7g01711 1101 SUPERFAMILY ARM repeat 54 126 IPR016024 -
Phco7g01711 1101 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 937 957 IPR018936 GO:0016301
Phco7g01711 1101 SMART pi3k_hr1_6 840 1099 IPR000403 -
Phco7g01711 1101 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Phco7g01711 1101 MobiDBLite consensus disorder prediction 480 500 - -
Phco7g01711 1101 MobiDBLite consensus disorder prediction 366 393 - -
Phco7g01711 1101 Gene3D - 723 893 - -
Phco7g01711 1101 MobiDBLite consensus disorder prediction 480 517 - -
Phco7g01711 1101 Pfam Phosphatidylinositol 3- and 4-kinase 840 1038 IPR000403 -
Phco7g01711 1101 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 818 1086 IPR000403 -
Phco7g01711 1101 MobiDBLite consensus disorder prediction 180 209 - -
Phco7g01711 1101 MobiDBLite consensus disorder prediction 442 461 - -
Phco7g01711 1101 MobiDBLite consensus disorder prediction 446 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01711 Phco-Chr7 17156721 17171701 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01711 7 17156721 17171701 Phco7g01711 7 17156721 17171701 ECH
Phco4g03087 4 51834975 51851314 Phco7g01711 7 17156721 17171701 PCT